Gene Shewmr4_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0872 
Symbol 
ID4250594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1024119 
End bp1025543 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content52% 
IMG OID638117435 
Productaldehyde dehydrogenase 
Protein accessionYP_733009 
Protein GI113969216 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGG CAACAGACCC AGCAAAAATC TCGCCACTCA CCGAGTTACT CCAACGCCAA 
CGTGCAAGTT ACTTGGCCGC TCCGAATCCC GATTACGCTA TCCGTAAAGA ACGCTTAATC
CGCCTTAAGG CCACCTTGCT GAAATTCCAA CAGCCACTCG TCGAGGCGCT GTCACAGGAC
TATGGCCACA GATCGGTCGA CGACAGCTTG ATTTCCGACA TTATGCCCGT GGTCAATAAC
ATCAATTACA GCCTGAAAAA CCTGAAGAAA TGGCTCAAGC CAAGCCGCCG TCATGCGGGT
ATCTTACTCG CCCCCGCCCA AGTGAAAGTG CATTATCAAC CACTTGGGGT TATTGGGATA
ATCGTGCCGT GGAACTTCCC CGTCATGCTC TCCATCAGCC CCTTAGTCAC GGCCATCGCC
GCTGGCAACC ATGCCATGCT CAAACTCTCG GAATTCACCC CAGCGACCAA TAGTGTCATT
AAGCAATTGC TTGCCGAAGT GTTTGAAGAA TCCCATGTTG CCGTGGTCGA AGGGGAAGCC
GATGTCGCGG CGCAGTTTTC AGCCCTGCCC TTCGATCATT TGCTGTTCAC AGGCTCAACC
ACAGTCGGTC GCCATGTGAT GCGCGCCGCC GCCAATAATC TCACGCCAGT GACTCTCGAG
CTGGGCGGTA AGTCGCCAGT GATTATCGCC CCCGATATGC CACTTGAGAT AGCAGTAGAA
CGAATGATTT ATGGTAAGTG TTTGAATGCT GGACAAATCT GTGTAGCACC TGACTATGTG
CTTTGTCCTA AGGCGAAAGT GGCAGAGTTT ATCCAAGCCT ATCAGACGAA ATTCCAGGCC
ATGTATGGCG CCATTACCCA AAACAAAGAT TACGGCAGCA TCATTAATGC CCGTCAGTTT
GAGCGTCTGC TAAGCGTGCT TGAGGATGCC AAGGCTAAAG GGGCTAAGGT GATCCCCGCC
TCGAATGACG TGATTGATAG CCAGCATCGT AAACTCGCGA CTCAGCTCAT TACCGACACC
ACTGAAGATA TGCTACTGAT GCAAGAGGAA ATCTTCGGCC CACTGCTGCC AGTGATTGGT
TATGACAGCC TAGATGAGGC CATTAGCTAC GTGAACCATC GCGCCCGCCC CTTAGCCCTG
TATGTGATGA GCTTTGATGA AGCGAGCCAA CAAAAAATCC TCAAGCAAAC CCATTCCGGC
GGTGTGTGCA TCAACGAAAC CGTGTTCCAT GTGGCGGCCG ATGATGCCCC CTTTGGCGGT
ATCGGTCCAT CGGGAATGGG CCATTACCAC GGCAAGGAAG GATTCCTCAC CTTTAGTCAC
GCTAAAACCG TGCTCAGCCG TGGTCGCTTC AACACGGGTA AGTTTGTCCA CCCTCCCTAT
GGTACTTTTA TCCAACGCAT GTTGATGAAG CTGTTTTTAC GCTAA
 
Protein sequence
MNMATDPAKI SPLTELLQRQ RASYLAAPNP DYAIRKERLI RLKATLLKFQ QPLVEALSQD 
YGHRSVDDSL ISDIMPVVNN INYSLKNLKK WLKPSRRHAG ILLAPAQVKV HYQPLGVIGI
IVPWNFPVML SISPLVTAIA AGNHAMLKLS EFTPATNSVI KQLLAEVFEE SHVAVVEGEA
DVAAQFSALP FDHLLFTGST TVGRHVMRAA ANNLTPVTLE LGGKSPVIIA PDMPLEIAVE
RMIYGKCLNA GQICVAPDYV LCPKAKVAEF IQAYQTKFQA MYGAITQNKD YGSIINARQF
ERLLSVLEDA KAKGAKVIPA SNDVIDSQHR KLATQLITDT TEDMLLMQEE IFGPLLPVIG
YDSLDEAISY VNHRARPLAL YVMSFDEASQ QKILKQTHSG GVCINETVFH VAADDAPFGG
IGPSGMGHYH GKEGFLTFSH AKTVLSRGRF NTGKFVHPPY GTFIQRMLMK LFLR