Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0872 |
Symbol | |
ID | 4250594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1024119 |
End bp | 1025543 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117435 |
Product | aldehyde dehydrogenase |
Protein accession | YP_733009 |
Protein GI | 113969216 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGG CAACAGACCC AGCAAAAATC TCGCCACTCA CCGAGTTACT CCAACGCCAA CGTGCAAGTT ACTTGGCCGC TCCGAATCCC GATTACGCTA TCCGTAAAGA ACGCTTAATC CGCCTTAAGG CCACCTTGCT GAAATTCCAA CAGCCACTCG TCGAGGCGCT GTCACAGGAC TATGGCCACA GATCGGTCGA CGACAGCTTG ATTTCCGACA TTATGCCCGT GGTCAATAAC ATCAATTACA GCCTGAAAAA CCTGAAGAAA TGGCTCAAGC CAAGCCGCCG TCATGCGGGT ATCTTACTCG CCCCCGCCCA AGTGAAAGTG CATTATCAAC CACTTGGGGT TATTGGGATA ATCGTGCCGT GGAACTTCCC CGTCATGCTC TCCATCAGCC CCTTAGTCAC GGCCATCGCC GCTGGCAACC ATGCCATGCT CAAACTCTCG GAATTCACCC CAGCGACCAA TAGTGTCATT AAGCAATTGC TTGCCGAAGT GTTTGAAGAA TCCCATGTTG CCGTGGTCGA AGGGGAAGCC GATGTCGCGG CGCAGTTTTC AGCCCTGCCC TTCGATCATT TGCTGTTCAC AGGCTCAACC ACAGTCGGTC GCCATGTGAT GCGCGCCGCC GCCAATAATC TCACGCCAGT GACTCTCGAG CTGGGCGGTA AGTCGCCAGT GATTATCGCC CCCGATATGC CACTTGAGAT AGCAGTAGAA CGAATGATTT ATGGTAAGTG TTTGAATGCT GGACAAATCT GTGTAGCACC TGACTATGTG CTTTGTCCTA AGGCGAAAGT GGCAGAGTTT ATCCAAGCCT ATCAGACGAA ATTCCAGGCC ATGTATGGCG CCATTACCCA AAACAAAGAT TACGGCAGCA TCATTAATGC CCGTCAGTTT GAGCGTCTGC TAAGCGTGCT TGAGGATGCC AAGGCTAAAG GGGCTAAGGT GATCCCCGCC TCGAATGACG TGATTGATAG CCAGCATCGT AAACTCGCGA CTCAGCTCAT TACCGACACC ACTGAAGATA TGCTACTGAT GCAAGAGGAA ATCTTCGGCC CACTGCTGCC AGTGATTGGT TATGACAGCC TAGATGAGGC CATTAGCTAC GTGAACCATC GCGCCCGCCC CTTAGCCCTG TATGTGATGA GCTTTGATGA AGCGAGCCAA CAAAAAATCC TCAAGCAAAC CCATTCCGGC GGTGTGTGCA TCAACGAAAC CGTGTTCCAT GTGGCGGCCG ATGATGCCCC CTTTGGCGGT ATCGGTCCAT CGGGAATGGG CCATTACCAC GGCAAGGAAG GATTCCTCAC CTTTAGTCAC GCTAAAACCG TGCTCAGCCG TGGTCGCTTC AACACGGGTA AGTTTGTCCA CCCTCCCTAT GGTACTTTTA TCCAACGCAT GTTGATGAAG CTGTTTTTAC GCTAA
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Protein sequence | MNMATDPAKI SPLTELLQRQ RASYLAAPNP DYAIRKERLI RLKATLLKFQ QPLVEALSQD YGHRSVDDSL ISDIMPVVNN INYSLKNLKK WLKPSRRHAG ILLAPAQVKV HYQPLGVIGI IVPWNFPVML SISPLVTAIA AGNHAMLKLS EFTPATNSVI KQLLAEVFEE SHVAVVEGEA DVAAQFSALP FDHLLFTGST TVGRHVMRAA ANNLTPVTLE LGGKSPVIIA PDMPLEIAVE RMIYGKCLNA GQICVAPDYV LCPKAKVAEF IQAYQTKFQA MYGAITQNKD YGSIINARQF ERLLSVLEDA KAKGAKVIPA SNDVIDSQHR KLATQLITDT TEDMLLMQEE IFGPLLPVIG YDSLDEAISY VNHRARPLAL YVMSFDEASQ QKILKQTHSG GVCINETVFH VAADDAPFGG IGPSGMGHYH GKEGFLTFSH AKTVLSRGRF NTGKFVHPPY GTFIQRMLMK LFLR
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