| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0867 |
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| Symbol | |
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| ID | 4250589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1019908 |
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| End bp | 1021575 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117430 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_733004 |
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| Protein GI | 113969211 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTACTGC GAACAAAATT AATCATTTAT TCAACAGTTT GTTGTGCTTT GGGTGTGTTA
CTCACCCTAG GCACCATGAG TTATCGCTCG TCAGTTTCCT CTCTTGTGGA GGATGCTCCG
CACACGTTGC CCGATATTAC CGTGCCTGAG CTGGATTTGG CGCAGCTCGA AGATGCGGTG
GCCGCAATCG AATCGACGAT TAAGGATACT GAGCAATTTC AAAAGGCACT CTCATTGCAG
GAGCGCTTGA AGACAGAGCA AATCAAACAC GAGCTACAAA AGTTAGAGCA ACTAAAGCAA
GAGCAAGTGC AGATTAAGCT CTATAAGCTC GATCGTTTGA AGGACGGGCT TTTTAGTCCC
GCCCCCCATC CTATTGAGGC GCCACCTATG GTTGCGCCGG TTGAACCTGT GATCCCCGCC
GAATTTAGCC TGTCGGAACA CACTCAGTCG ATGCCAGCAG TATTTGACAT GCTGCTGATA
TTGCTGCTGG CCTGTGGTAG CTGCGCGCTT GGGGTTGCTT GGTTTACTCG CCATTTAGCT
CGCAGTCTCA ATGCCTTAGA GGTTGGTTTA CTCAACTTTA ACGACAATGA CTTTAGCGTG
AGCATTCCGG CAAATGGTGA GGGGCAGCTG AAAGCATTGG CGGAATTATT CAATGATTCG
GCGGCTAAGC TGCGCCAAGA ACGGCAATAT ATTTACCAGC GGGAACTGCT GCTGGATAAA
GTGATTCAAA GTTCTCCGAA TGTGATGCTG CTGTTTAACG ACCACCAAAA ACTCATGTAT
GCCAACGATG CGGCGCGGCA TCTTTTTCAT ATCAAAGGCA AGATGGAAGG CTTGAGCCTC
GACGAGCTGC TGCAAGACTT ACCCGAAGCG CTTGCCTTGG CCCTTAAGCA AGAAAAGAGC
GGCCTGTTTA CCATGGGTGA GGATGATACT GAGACTTGGT ATCTGAGCCG TGGCCAGTTT
TTACTGAATA ACCAACAACA TAACTTAATC TTGCTCAAGC AGATGACCCG AGAACTCAAT
CGTCAGGAAG TGGCGGTTTG GAAGAAGGTG ATCCGCATTA TCAGCCATGA GTTGAATAAT
TCTGTCGCGC CCATCGCCTC CATGGTGAAC TCGGGGCGTT TACTGACGAA AGATCTCGAT
AATCCCAAGC TTAAGCTGAT ATTCGACACT ATAGAGAGTC GAACGAATCA CTTGAGCCAG
TTTATTTTCA ATTATGCGCG CTTTGCTAAA CTGCCTTTAC CGCAGCGACG TGATGTGCCG
TGGCAGCAGC TTATCGAACA TTTAACCCAA CATTATCCTT TTACCTTAGC CAATGAGTTA
CCCGTAGAGA TGGGCTATTT CGACCAAGGG CAAATGGAGC AGGTTCTGCT GAATTTACTC
AAAAATGCCC ATGAATCAGG TTCGAATCCC GATGAAGTCA CGCTCTCGAT TCGCCACCAA
ACCATGGTGG ATGGGGCGGG CTTTAGTATC AAAATCGAGG ATCGCGGCAG CGGTATGTCC
GAGGAAGTGT TAGAACAAGC CCTATTGCCC TTTTACTCGA CTAAACAATC GGGCACGGGG
TTAGGTTTGC CCCTTTGCCG CGAGATTATC GAAGCCCACG ATGGCAGCAT TAGCATGCAT
AATCGCAGCG ACGGTGGTCT GTCGGTACAT TTGTGGCTGC CGCAATAA
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| Protein sequence | MLLRTKLIIY STVCCALGVL LTLGTMSYRS SVSSLVEDAP HTLPDITVPE LDLAQLEDAV
AAIESTIKDT EQFQKALSLQ ERLKTEQIKH ELQKLEQLKQ EQVQIKLYKL DRLKDGLFSP
APHPIEAPPM VAPVEPVIPA EFSLSEHTQS MPAVFDMLLI LLLACGSCAL GVAWFTRHLA
RSLNALEVGL LNFNDNDFSV SIPANGEGQL KALAELFNDS AAKLRQERQY IYQRELLLDK
VIQSSPNVML LFNDHQKLMY ANDAARHLFH IKGKMEGLSL DELLQDLPEA LALALKQEKS
GLFTMGEDDT ETWYLSRGQF LLNNQQHNLI LLKQMTRELN RQEVAVWKKV IRIISHELNN
SVAPIASMVN SGRLLTKDLD NPKLKLIFDT IESRTNHLSQ FIFNYARFAK LPLPQRRDVP
WQQLIEHLTQ HYPFTLANEL PVEMGYFDQG QMEQVLLNLL KNAHESGSNP DEVTLSIRHQ
TMVDGAGFSI KIEDRGSGMS EEVLEQALLP FYSTKQSGTG LGLPLCREII EAHDGSISMH
NRSDGGLSVH LWLPQ
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