Gene Shewmr4_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0863 
Symbol 
ID4250585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1015051 
End bp1015791 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID638117426 
ProductABC transporter related 
Protein accessionYP_733000 
Protein GI113969207 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCAA TGAAGAATAT CAGCAAGGTT TTTAAAACGG ACTTAGTGGA AACCCACGCG 
CTGCGGGATT TCAACCTTGA GGTGAATGAG GGCGAGTTTG TGGCGGTCAC TGGTCCTTCT
GGCTCAGGCA AAACCACCTT CTTAAATATC GCAGGCTTGC TCGAAGGCTT CACCCATGGG
GATTATTTTT TAGATGGAAT TAATGTCTCT AACCTTAGTG ATAACAAGAG TGCCGCCGTA
CGCAACGAGA AGATTGGCTT TATCTTCCAA GGCTTTAACT TGATCCCCGA TCTTAACCTC
GCGGAAAATA TTGAGGTGCC GCTGCGCTAC CGTGGTTTTA GTGCCAAGGA GCGTAAACGC
CGTGTGGAGC AAGCGTTAGA GCAAGTGGGC TTAGGTGCGC GGATGAAGCA TTTACCGACC
CAGCTATCCG GCGGTCAGCA GCAAAGGGTG GCGATTGCCC GCGCTTTAGC GGGGGAGCCA
CGCTTCCTGC TCGCCGACGA ACCTACGGGT AACCTCGACA GTTTAATGGC CCGCCAAGTG
ATGGAATTAT TAGAGAATAT TAACCAATCT GGCACCACGA TCATCATGGT GACCCACGAT
CCTGAACTGG CCCGCCGTGC CCAGCGCAAT ATTCAAATAG TCGATGGTCA GGTCTGCGAC
TTTACCATGT ATCAACCCAA TGCGGCCCGC AGTGCAAGCC ACGGCAGTGT CGATAAACTG
GTTGCTAACG CCCAAGGCTA G
 
Protein sequence
MLSMKNISKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG 
DYFLDGINVS NLSDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFSAKERKR
RVEQALEQVG LGARMKHLPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLENINQS GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPNAAR SASHGSVDKL
VANAQG