| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0853 |
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| Symbol | |
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| ID | 4251836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1006905 |
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| End bp | 1007363 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117416 |
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| Product | methylation site containing protein |
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| Protein accession | YP_732990 |
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| Protein GI | 113969197 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACTA AGAAAATCCT AGGGTTTACC TTAACCGAGC TCATGGTTGT AGTGGCCATA
GTGGCCATCA TAGCAGGCAT TGCAGCCCCC TCATTTGCGT CTATGATACG CGAAAATACC
GCACGTACTC AGGTCAATGA ATTGTTAGCA TTGACGAATT ATGCCCGTTC GGAAGCCATA
AAGCGTCAAT CCAATATCCA AGTTGCAATC ACCTCGTTGG GTGCTTCTGG TTGGAAGGCT
CAGATACTGT CTGGTACGGA GTTGCTCAAA GAAATGGATA AATCCGGCAG TGTTGTGAGC
GTCAGTGCTG TCAATTTAGG TTTTGATATG CGAGGTCGAC GCGCTACTGG TACAGATAAT
TGTGTCAGTG TCAGTTACAG CAGCTACACA AAGCAACTAC AGGTTGGACT CGGGGGGAGC
CTCAAAGTGA CAAGTGGCAG TTGCCCAGAA TCATCCTGA
|
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| Protein sequence | MSTKKILGFT LTELMVVVAI VAIIAGIAAP SFASMIRENT ARTQVNELLA LTNYARSEAI
KRQSNIQVAI TSLGASGWKA QILSGTELLK EMDKSGSVVS VSAVNLGFDM RGRRATGTDN
CVSVSYSSYT KQLQVGLGGS LKVTSGSCPE SS
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