Gene Shewmr4_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0840 
Symbol 
ID4251980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp994874 
End bp995839 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID638117403 
ProductABC transporter related 
Protein accessionYP_732977 
Protein GI113969184 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCA CATCGAGCCT TGCGCCCTTA GCGCCCGCTG CGACTTCCGC CAATATGGCA 
CTTCAAGTGA GCCAATTGAG CTGGGCGATT GAGGGAAAAA CCATTCTCTC GGAGATAAGC
TTTGCCCTGC CGAAGGGGGA AATGCTCGGG CTGATTGGCC CCAATGGCGC GGGTAAATCC
AGTTTGCTGC GCTGTTTATA CCGCTTTATT CGCCCTGCTA AAGGGCATAT CAGCCTGTTT
TCGCAGGATA TTAGCGAACT GTCGCCCAAG GCGTTTGCCT GTAAAGTGGC GGTGGTGCAG
CAGGATACGC CGCAATATTT CGATATGACC ACAGAGCAAT TGGTTGCCAT GGGACTCACG
CCCCATAAGG GGATGTTTGA TAGCCATTCC AGCGAAGACA GTGACAAGAT TGCCAAGGCG
CTGGACAAGG TCGGCCTGAG TCATAAAGTG CATCAGCAAT ACGATCGATT ATCGGGCGGT
GAGAAGCAGC GCGCCCTGAT CGCCCGTGCC ATAGTGCAGC AGCCGCAGTT ATTGATTTTA
GATGAGCCGA CAAATCACCT CGATATCCGC TATCAAATTC AAATCTTAGA GCTAGTGCGA
AGCCTTGGGA TCAGCGTCAT CGCCTCGATT CATGACCTGA ATTTAGCCAG CGCCCTGTGC
GACCACTTAT TGCTACTGGA TAAAGGGCTG GTGAGTGCCA TGGGCACGCC GGCTCAGGTG
TTAACCGAAG AACGTATCGC CGAAGTGTTT GGAGTATGCG CCCAAGTGAC GCCCCATCCA
CAGCATGGTA ACCCCTTGAT TAATTACTTT TATGGTTATC AAAAGCCTAA GAGCGATACT
GCGGACGCAG CGAGTGACTC CCACCCAGTT TCGGCTCAAG CGTTACCTCC TGTGGCCTGC
GCCTGTCATA ACCCCGGGGC GCCTAACGCG GCCTTGCACA AGCATAGCGT TGAACCCACG
CCATGA
 
Protein sequence
MHSTSSLAPL APAATSANMA LQVSQLSWAI EGKTILSEIS FALPKGEMLG LIGPNGAGKS 
SLLRCLYRFI RPAKGHISLF SQDISELSPK AFACKVAVVQ QDTPQYFDMT TEQLVAMGLT
PHKGMFDSHS SEDSDKIAKA LDKVGLSHKV HQQYDRLSGG EKQRALIARA IVQQPQLLIL
DEPTNHLDIR YQIQILELVR SLGISVIASI HDLNLASALC DHLLLLDKGL VSAMGTPAQV
LTEERIAEVF GVCAQVTPHP QHGNPLINYF YGYQKPKSDT ADAASDSHPV SAQALPPVAC
ACHNPGAPNA ALHKHSVEPT P