| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0830 |
|---|
| Symbol | |
|---|
| ID | 4251970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 975171 |
|---|
| End bp | 977480 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638117393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732967 |
|---|
| Protein GI | 113969174 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.289866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACT CGCCATTTCG CTTTATTAGC CTCGCCATTG CCGGGATCAG CCTAGTCGGC
GCCCATGCAC AGGCGGCGCA AAACCTCTCC TCCATGATGG TCGAAATTCG CCAGCAGGAC
GGTATTCCCA GCTATTACAA TCTCGCCACG GGCATGCCCT TAAATGGTGA TATCGCCATC
GTTCGCGATA ACCAAGGTTA TACCTTAGGG CAATTTTCGC AGGGGATACC GAATGGGAAA
TGGCAGGTTT TTCATAGTAA TAACAGCAGA ATTGTCGAAG GTAACTATCA ACTCGGTTAC
CAAGATGGCA CCTGGCGACT GTTCGACTTA GATGGCGCCA TGACCGAGGA GCAGCAATTT
ACCAAGGGAG TCCCCGTTGG CGAATGGAAG GAATTTAACG CCACGGGCAA TGTTACCCAA
AGCACCCTCT ATAAAAATGG CCAAAAGTCC CAAGTAAAAC GATTCTTCCC GAGTGGCAAA
TTACAGGCGC AGGAAAGCTA CCTCGATAAC CTTCGCCACG GTAAATGGGA AAGCTTTTAT
GAAAATGGCA CCCTCTCCCA AAGCCAAACC TACGCCAATA ACCAACTCTC TGGCCCCTAT
CTCGAGCAAA ATGCCGAGGG CCAAGTCGTT GTAAGTGGCC GCTTCGATGC CAACGGCCGC
CGCCAAGCTT TATGGGAAAC CTTTTTCGAC GATGGTACTA AGGCCAGTGC CAGCCAATTT
AATCTCGATA AACTCGAGGG TGAAGAACGC ACCTTTTATC CCAGTGGCGA ACTGGCAAGC
CTGTGCCACT ATCAAGCCGG GCTTCGCCAC GGTAAATGCC AACAATTCAA TGAACTGGGC
AAACTCCAAG TGGAGGAGCA ATACCTCAAC GATGTACTAG AGGGACGTCA GCAATACTTC
AACCTTGAGG GTGTACTCAC CAGCGATTTG AATTACAAGC AGGATATGCT CGCTGGCACG
CAAAAGTATT TCCATTCCAA CGGCCAACTG AAAGAGCTGC GAACCTATCA GGACTCGCAA
CTGGCCGATA ATGGTCAATA CCCCTTGCAT GGCCCATCTG AGCGTTATGA TGCGGACGGT
CATCTTATCG AAAAAAGCAG CTACAACATG GGCTTAAAAG ATGGATTATT TGAACGCTAT
AACGGCGGTA AACTGCAAAC CGCAGAGGTG TGGAAGCTAG GTCAAAGAGA CGGAGAATTC
CGTCGTTACC ACACTAATGG CCAACTACGC AGCTTAGATG TATATGTCGA TGGCAAACTC
ACTGGCCGCT CAGAATCCTA CTATGAGGAT GGCTCGGTGA ATGAACGCGG TGAGCGCATC
GAAGGCGCCT GGGTCGGTAA ATACGAATCC TTTTACGACA ATGGCAAGCC AAGAGAACTC
GCCCACTACG CCCGCACGAA AGCGGATAAC AGCAATAGCT ATCCCCTCGA TGGCCACTTT
AGCCGTTGGT ACTACAATGG CGATCTCAAT GAGGAAGGGG ATTATCAAAA CGGCGTTAAA
GAGGGACTGT GGATCCAATA TCAGCAGGGA CAAAAACAAA AAGAACAGAC CTTTGTTAAC
GGCAAACTCA ATGGCGATTA TGCCGAGTAT TACCAAGGTC GACGCCGCGT CACTGGCCAA
TATGAGGATA ATCAAAAAAC CAGTCTCTGG ATTGATTACC GCTACGAAGC CAAAGATCCA
ACCTACGGCG CGATCCCCGA GGGCAATATC AGCCAGAAAA CCCATTGGAA GGATAATAAG
CGTAACGGCA CAAGCGAGTA CTACAGCTTT AAGCAAGTGG TTTATCGTTT AGAAACCTAT
GATAACAATG ATAAAACGGG CACCTATGCC GAATATTATC CTAATAATGG CCAGCTCAAA
CTGAGCGGTA CTATGGATAA AGGTCAGCAA ACGGGACTGT GGGAAAGCTG GTATGAGGAT
GGCATTTTAG CCGCCAGCAG CGAGTTTTTA GATAACCAAC AGCATGGCAG CAGCAAAGAG
TATTACAGCA ATGGCCAGCT CAAACTCGAA GCCCAATACA CTAAAGGCGA ACTCGACGGC
GAGCGCAGGG AATACCACCA AAATGGTAAA CCTAAACTAA TTGAAACTTG GTTAAAGGGT
CAGAAGGAAG GCGATGCCAG CTATTACCAC ACCAATGGCA AACTCGCCGA ACAAGGCACT
TATCTTAAGG ATCGCAGGGA AGGCTTATGG CAGCAATTTT GGCCCAGTGG CGAAAAACGC
AGTGAAGGCA GCTATATCGC CGACCGCCAA GCGGGGGATT GGAGCCACTA CGATCAGCTC
GGTAAGTTGA TTAATACCGA GCATTTCTAA
|
|---|
| Protein sequence | MYNSPFRFIS LAIAGISLVG AHAQAAQNLS SMMVEIRQQD GIPSYYNLAT GMPLNGDIAI
VRDNQGYTLG QFSQGIPNGK WQVFHSNNSR IVEGNYQLGY QDGTWRLFDL DGAMTEEQQF
TKGVPVGEWK EFNATGNVTQ STLYKNGQKS QVKRFFPSGK LQAQESYLDN LRHGKWESFY
ENGTLSQSQT YANNQLSGPY LEQNAEGQVV VSGRFDANGR RQALWETFFD DGTKASASQF
NLDKLEGEER TFYPSGELAS LCHYQAGLRH GKCQQFNELG KLQVEEQYLN DVLEGRQQYF
NLEGVLTSDL NYKQDMLAGT QKYFHSNGQL KELRTYQDSQ LADNGQYPLH GPSERYDADG
HLIEKSSYNM GLKDGLFERY NGGKLQTAEV WKLGQRDGEF RRYHTNGQLR SLDVYVDGKL
TGRSESYYED GSVNERGERI EGAWVGKYES FYDNGKPREL AHYARTKADN SNSYPLDGHF
SRWYYNGDLN EEGDYQNGVK EGLWIQYQQG QKQKEQTFVN GKLNGDYAEY YQGRRRVTGQ
YEDNQKTSLW IDYRYEAKDP TYGAIPEGNI SQKTHWKDNK RNGTSEYYSF KQVVYRLETY
DNNDKTGTYA EYYPNNGQLK LSGTMDKGQQ TGLWESWYED GILAASSEFL DNQQHGSSKE
YYSNGQLKLE AQYTKGELDG ERREYHQNGK PKLIETWLKG QKEGDASYYH TNGKLAEQGT
YLKDRREGLW QQFWPSGEKR SEGSYIADRQ AGDWSHYDQL GKLINTEHF
|
|---|
| |