| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0828 |
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| Symbol | pbpG |
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| ID | 4251968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 972370 |
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| End bp | 973326 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117391 |
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| Product | D-alanyl-D-alanine endopeptidase |
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| Protein accession | YP_732965 |
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| Protein GI | 113969172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0444108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.154729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC CTTCTCTGCT TGGTAGTTTT ATCTTGGTAT GCAGCAGTTT AACTGTTGCC
GCGACAGCGC ATTCTGCCGA TTCGGCCTCT GTCACTACAA AAAGCACCGC CACGGCGAAA
AAAGCCCCTG CAAAACAGCA GGAAGTGGCC GCCAATAGTG CGCTGGTGGT GGATCTAAAA
ACCAACGAAA TTCTCTATTC CAGTAATCCC GATGCCGTAA GGCCTATTGC CTCTGTGACT
AAGCTGATGA CCGCCATGGT GACCTTAGAT GCTAAGTTGC CTATGGATGA AAAGCTTGCC
ATCAATATCA ATGACACTAA GGAAATGCGC GGTGTCTACT CTCGAGTGCG TATCGGCAGT
GAAATTAGCC GTAAAGATAT GTTATTGCTG ACATTAATGT CATCAGAAAA CCGTGCTGCA
GCGAGTCTTG CCCACCATTA TCCCGGTGGT CATAAGGCCT TTATTAAGGC GATGAACGCT
AAGGCAAAAG CCCTAGGTAT GAAGAATACT CGTTATGTGG AGCCGACTGG GCTGTCAGAG
AAAAACGTTT CGAGTGCCCG CGATCTGGTG GTGTTACTCA AGGCCAGCGA AGGCTATCCC
ATGTTAGGTC AGTTAAGCTC GACCGAAAAG AAAACCGTCA CCTTTGGCAA ACCTAAGTAC
AGCCTCGACT TTAGAAACAC TAACCGTTTG GTTTACAAAG ATAACTGGAA CATTCACCTC
ACTAAAACTG GCTTTACCAA TGAAGCAGGC CATTGTTTAG TGATGCGTAC CGAAATGGCT
AAACGCCAAG TGGCCTTTGT GGTGCTCGAT GCCTATGGTA AATACACCCA TATGGCGGAT
GCTAACCGTT TACGTAACTG GTTAGAAACA GGAAAAGTGA CTCCTATCCC TGCCGAAGCT
AAGCAGTATA AAAAGCAGCG CAGCCAACAG CAGTTTGCCA AAGTCAGCGA GACCTAA
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| Protein sequence | MKIPSLLGSF ILVCSSLTVA ATAHSADSAS VTTKSTATAK KAPAKQQEVA ANSALVVDLK
TNEILYSSNP DAVRPIASVT KLMTAMVTLD AKLPMDEKLA ININDTKEMR GVYSRVRIGS
EISRKDMLLL TLMSSENRAA ASLAHHYPGG HKAFIKAMNA KAKALGMKNT RYVEPTGLSE
KNVSSARDLV VLLKASEGYP MLGQLSSTEK KTVTFGKPKY SLDFRNTNRL VYKDNWNIHL
TKTGFTNEAG HCLVMRTEMA KRQVAFVVLD AYGKYTHMAD ANRLRNWLET GKVTPIPAEA
KQYKKQRSQQ QFAKVSET
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