Gene Shewmr4_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0810 
Symbol 
ID4250742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp946117 
End bp946641 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID638117373 
Productmethyltransferase type 12 
Protein accessionYP_732947 
Protein GI113969154 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0500] SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0743802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG CTACACTCAG CACGGCCTCG AGCTTAATTA CCCAGTTTTC ATGGCCTGAG 
CTTACAGGGC TTAAGGTATT GGATTTAGCC TGCGGTTCAG GCCGAAATGG TCTGTGGTTT
CTCTCCCAAG GTTGTGAAGT GACCTTTATC GACCAGGATT TGAGTGCCTT GGCTAAGCTG
ACACACGACA AAGCACATCA ATGGCAGTGG AATTTAGAAG ACGGCAGCGC GCCTCAGTTA
CCCCAAGAGT CCTTTGATAT TGTATTAGTC TTTAATTACT TACATCGACC ACTATTTCCG
CAAATCGCTG CGAGCCTAAA GTCCGGCGGA CTGATTGTGT ATGAGACCTT TACGTGGCAA
CAGGCGCAAA TTGGTCGACC TCGCAACCCT GATTTTTTAC TCACAGAGAA CGAACTGCAA
TCCGTATTTG CTAACTGGCA ACCTTTGCAT TACTTTGAAG GTCGGTTAAG CGATGCTGCT
GGTACTGAAA GTGCTAAGGC GCAGCGGATC GCACGAAAAC CCTAG
 
Protein sequence
MTHATLSTAS SLITQFSWPE LTGLKVLDLA CGSGRNGLWF LSQGCEVTFI DQDLSALAKL 
THDKAHQWQW NLEDGSAPQL PQESFDIVLV FNYLHRPLFP QIAASLKSGG LIVYETFTWQ
QAQIGRPRNP DFLLTENELQ SVFANWQPLH YFEGRLSDAA GTESAKAQRI ARKP