| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0808 |
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| Symbol | |
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| ID | 4250740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 943415 |
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| End bp | 945205 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117371 |
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| Product | flavocytochrome c |
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| Protein accession | YP_732945 |
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| Protein GI | 113969152 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0624147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACAA GAAAGATTCA AAAAACAGCA CTAGCCATGC TGATCTCTGG TGCGATGGCA
GGCACAGCCT ATGCCGCGCC AGAAGTACTA GCCGATTTTC ACGGTGAAAT GGGCGGCTGC
GATAGCTGCC ACGTATCAGA CAAAGGTGGC GTGACTAACG ACAACCTGAC CCATGAAAAT
GCCCAATGTG TTAGCTGCCA CGGTGATTTA AAAGAACTGG CTGCTGCAAC GCCAAAAGAT
AAAGTTTCTC CGCACAAATC TCACTTAATT GGTGAAATCG CTTGTACCAG CTGCCATAAA
GGCCACGAAA AATCAGTGAC TTATTGTGAC GCTTGCCATA GTTTCGGCTT CGATATGCCA
TTTGGCGGCA AGTGGGAACG TAAGTTTGTG CCTGTTGATG CAGACAAAGC GGCTCAAGAT
AAAGCCATTG CCGCTGGCGT GAAAGAAACC ACAGACGTCG TAGTTATCGG TTCGGGTGGT
GCAGGTCTTG CTGCCGCCGT TTCAGCCCGT GATGCTGGCG CGAAAGTGAT TCTGTTAGAA
AAAGAACCTA TCCCTGGTGG TAACACTAAA CTGGCTGCTG GCGGTATGAA CGCTGCAGAA
ACTAAGCCAC AGACTAAGTT AGGTATCGAA GATAAGAAAC AAATCATGAT CGACGACACC
ATGAAAGGTG GTCGTAACAT CAACGATCCT GAATTAGTGA AAGTCCTGGC CAACAACTCT
TCAGACTCTA TCGATTGGTT AACCGCTATG GGTGCCGACA TGACTGACGT GGGCCGTATG
GGTGGCGCAA GCGTGAACCG TAGTCACCGT CCAACCGGTG GTGCGGGTGT GGGTGCACAC
GTTGCACAAG TGCTGTGGGA CAATGCCGTT AAACGTGGTA CTGACATTCG TTTAAACAGC
CGTGTTGTAC GCATCCTTGA AGATGCAAGC GGCAAAGTGA CCGGCGTTTT AGTGAAAGGT
GAATACACTG GCTACTATGT GATCAAGGCC GATGCAGTCG TGATCGCTGC CGGTGGTTTT
GCGAAAAACA ACGATCGCGT CGCTAAGTAC GATCCTAAGT TAAAAGGCTT TAAAGCGACT
AACCACCCAG GTGCAACCGG TGACGGCTTA GACGTTGCTC AGCAAGCGGG CGCCGCAACT
CGTGACTTAG AATACATCCA AGCTCACCCA ACTTACTCAC CAGCCGGTGG TGTGATGATC
ACCGAAGCGG TACGTGGTAA CGGTGCTATC GTGGTTAACC GTGACGGTAA CCGCTTCATG
AACGAAATCA CGACCCGAGA TAAAGCGTCT GCAGCGATTC TGCAACAGAA AGGCGAAAGC
GCTTACCTTG TATTCGATGA CTCTATCCGT AAGAGCTTAA AAGCCATCGA AGGCTATGTT
CACTTGAACA TCGTTAAAGA AGGCAAGACC ATCGAAGATT TAGCGAAACA ACTCGATGTG
CCAGCCGCTG AACTGGCGAA AACCGTCACT TCTTACAACG GTTTTGTGAA ATCAGGTAAA
GACACACAAT TCGAGCGTCC AAACCTGCCA CGTGAAATCG CCACTGCGCC TTTCTATGCC
TTAGAAATCG CACCAGCGGT TCACCACACT ATGGGTGGTA TCGTTATCGA TACTCAAGCC
GAAGTGAAGA GTGAAAAAAC CGGCAAACCT ATCAATGGTT TATATGCAGC AGGTGAAGTG
ACTGGTGGTG TTCACGGTGC TAACCGTTTA GGTGGTAACG CCATCTCTGA TATCGTGACC
TATGGCCGTA TCGCGGGTGC ATCTGCCGCG AAATACGCGA AAGATCACTA G
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| Protein sequence | MFTRKIQKTA LAMLISGAMA GTAYAAPEVL ADFHGEMGGC DSCHVSDKGG VTNDNLTHEN
AQCVSCHGDL KELAAATPKD KVSPHKSHLI GEIACTSCHK GHEKSVTYCD ACHSFGFDMP
FGGKWERKFV PVDADKAAQD KAIAAGVKET TDVVVIGSGG AGLAAAVSAR DAGAKVILLE
KEPIPGGNTK LAAGGMNAAE TKPQTKLGIE DKKQIMIDDT MKGGRNINDP ELVKVLANNS
SDSIDWLTAM GADMTDVGRM GGASVNRSHR PTGGAGVGAH VAQVLWDNAV KRGTDIRLNS
RVVRILEDAS GKVTGVLVKG EYTGYYVIKA DAVVIAAGGF AKNNDRVAKY DPKLKGFKAT
NHPGATGDGL DVAQQAGAAT RDLEYIQAHP TYSPAGGVMI TEAVRGNGAI VVNRDGNRFM
NEITTRDKAS AAILQQKGES AYLVFDDSIR KSLKAIEGYV HLNIVKEGKT IEDLAKQLDV
PAAELAKTVT SYNGFVKSGK DTQFERPNLP REIATAPFYA LEIAPAVHHT MGGIVIDTQA
EVKSEKTGKP INGLYAAGEV TGGVHGANRL GGNAISDIVT YGRIAGASAA KYAKDH
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