| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0807 |
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| Symbol | |
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| ID | 4250651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 942180 |
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| End bp | 943169 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117370 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_732944 |
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| Protein GI | 113969151 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.195319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG GATTTTTTAG CGCAAAACAC TACGACATGC AGCATTTTAA CCGTACAAAT
GCCGCATTTG GTGCGCAAAT TGAGTATTTC GATTATCGCC TCTGCATGCA AACCGTTAAG
CTTGCCGAAG GTTTTGAGGT GGTCTGCGCC TTTGTTAACG ATTCCCTCTG TGAAGAAGTG
TTGGTCGAGC TTGCCAAAGG TGGCACGAAA ATCATTGCCA TGCGCTGCGC GGGTTTTAAC
AATGTCGACT TAGTCGCCGC CAAACGCTTA GGCATGCAAG TGGTCAACGT CCCTGCCTAT
TCGCCGGAAT CTGTGGCCGA GCACACAGTC GCCTTGATGC TGACCCTAAA CCGTAAAATC
CATAAGGCCT ACCAACGCAC CCGTGATGCG AACTTCTCCC TCGAAGGCTT GGTCGGTTTT
AACATGTTTG GCAAAACCGT TGGCGTAATA GGCACAGGTA AGATTGGGGT CGCCACAATT
AAGGTATTGC TCGGTTTTGG CTGTAAAGTG ATTGCCTTTG ACCCTTACCC AAATCCTGCG
GTAGAAGCGC TCAATGTGGA ATATCAGGAT CTGGATACCA TTTACGCCAA TAGCGATATT
ATCAGCCTGC ACTGTCCATT AACCGCCGAT AACCACCATC TGCTGAATAA AGAAAGCTTT
GCCAAGATGA AACCCGGCGT CATGGTGATC AACACCAGCC GCGGCGGTCT GCTCAACGCC
TTCGATGCAA TGGAAGCCTT AAAACTCGGC CAGATTGGCT CCTTAGGGCT TGATGTGTAT
GAAAACGAAA AAGAATTATT TTTCGAGGAC AAGTCGAACC AAATCATTCA GGACGATGTG
TTCCGTCGCT TATCCGCCTG CCACAACGTG ATTTTTACCG GTCACCAAGC CTTCCTCACC
GAAGAAGCAC TGGGCGCGAT TGCACATACA ACCCTGAGCA ATGTCAAAGC CCTACTCGCG
GGCGAGCGCT CTGGTAACGA ACTGTTTTAA
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| Protein sequence | MRIGFFSAKH YDMQHFNRTN AAFGAQIEYF DYRLCMQTVK LAEGFEVVCA FVNDSLCEEV
LVELAKGGTK IIAMRCAGFN NVDLVAAKRL GMQVVNVPAY SPESVAEHTV ALMLTLNRKI
HKAYQRTRDA NFSLEGLVGF NMFGKTVGVI GTGKIGVATI KVLLGFGCKV IAFDPYPNPA
VEALNVEYQD LDTIYANSDI ISLHCPLTAD NHHLLNKESF AKMKPGVMVI NTSRGGLLNA
FDAMEALKLG QIGSLGLDVY ENEKELFFED KSNQIIQDDV FRRLSACHNV IFTGHQAFLT
EEALGAIAHT TLSNVKALLA GERSGNELF
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