| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0806 |
|---|
| Symbol | |
|---|
| ID | 4250650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 941375 |
|---|
| End bp | 942112 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638117369 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_732943 |
|---|
| Protein GI | 113969150 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.248795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTGA CTCAGCAAAC TCAGGATATC AACACGCCCA CAGGGCCGAT GCGAACTTAT
GTCTATCGCC CAGATGCCCC AGGGCAATTC CCCTGTATCC TCTTCTATTC TGAGATTTTT
CAGCAAACCG CGCCCATCGC CCGCACCGCG ACTATCCTCG CAGGCCATGG TTTTGTGGTG
TTAGTGCCAG AAGTCTTCCA TGAGCTTAAT CCGATAGGCA CAGTGTTGGC CTATGACGAT
GTGGGCAAAG ATAAAGGCAA TGCCGATAAA TTTGCCAAGC CCTTAGAGCA ACACGACAGC
GACACCCAAG CCCTTATCGA TTTTGCTCGC CAGCAAAGTT ATTGCACCGG TAAAGTCGGC
AGCATGGGTG TGTGTATTGG CGGCCACTTA GCCTACCGCG CCGCACTTAA TCCCGAGATA
TTGGGCGCTT TTTGCCTCTA TCCGACCGAC ATTCACTCCA ATACCCTACC CTGTGCCTAC
GGCAATGATT CACTGAGTCG CAGCGGCGAT ATTCAAGGGG AATTAGTGTT AGTGTTTGGC
AAGCAAGATC CCCATGTATC ACCCGAAGGG CGTGTATTAA TCCACCAACA GTTGATGGCC
AAAAACCGCA ATTTCAGTTG GTTAGAGGTT AATGCTCAGC ATGCTTTTAT GCGTGATGAG
GGTGAGCGCT ACGATCCCGC ACTGGCGCTG CAAATGTATC AACAATCCGT GGCGTTTTTT
CACCGAGTAT TGAGATAG
|
|---|
| Protein sequence | MLVTQQTQDI NTPTGPMRTY VYRPDAPGQF PCILFYSEIF QQTAPIARTA TILAGHGFVV
LVPEVFHELN PIGTVLAYDD VGKDKGNADK FAKPLEQHDS DTQALIDFAR QQSYCTGKVG
SMGVCIGGHL AYRAALNPEI LGAFCLYPTD IHSNTLPCAY GNDSLSRSGD IQGELVLVFG
KQDPHVSPEG RVLIHQQLMA KNRNFSWLEV NAQHAFMRDE GERYDPALAL QMYQQSVAFF
HRVLR
|
|---|
| |