Gene Shewmr4_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0753 
Symbol 
ID4251439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp875251 
End bp876468 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID638117316 
ProductNa(+)-translocating NADH-quinone reductase subunit F 
Protein accessionYP_732890 
Protein GI113969097 
COG category[C] Energy production and conversion 
COG ID[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
TIGRFAM ID[TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG CAATAGGCAT AGGCATGTTC ACCTTAGTGG TGTGCCTACT GGTGATAGTA 
ATCCTTATCG CCAAAAAGAA ATTAGTGACT ACCGGTGAGA TCACTATCGG GATTAACGAC
GATGCCGAGA AAAGCATTAA AGTTGCCGCG GGCGACAAAC TGCTTGGCGC CTTGGCGAGT
AAGAATATTT TTATTCCCTC GGCCTGTGGC GGCGGCGGTA CCTGCGGCCA GTGCCGGGTG
AAAGTCAAAT CGGGCGGTGG TGATATTCTG CCAACAGAAC AAGGGCATAT CACTAAAAAA
GAAGCCAAAG AAGGTTGTCG TCTCGCCTGC CAAGTCGCGG TGAAAACCGA TATGGAACTT
GAGCTAGAGG AAGAAATATT CGGTGTGAAG AAGTGGCAAT GTGAGGTGAT CTCAAACGAT
AACAAGGCCA CCTTTATCAA AGAGTTATTG CTAAAACTGC CCGAGGGTGA AGACGTACAC
TTCAAGGCGG GTGGCTATAT TCAAATTGAA GCGCCAGCCC ATGTGGTGAA GTATGCCGAT
TTTGATATTC CGGCTAAGTA CCGCGACGAT TGGGAAAAAT ACGGCCTGTT CGACTTAGTT
TCCACCGTCA ATGAAGACGT GCTGCGCGCC TATTCGATGG CGAACTATCC CGATGAAAAG
GGCCGCATCA TGCTTAACGT GCGGATTGCC ACGCCACCAT CGGCCAATGT GCCACCGGGT
AAGATGTCTT CTTACATCTT TAACCTCAAG GCGGGGGATA AGGTGACCAT CTCTGGCCCA
TTCGGCGAGT TCTTTGTGAA AGAAACCGAT GCGGAAATGG TATTTATCGG CGGTGGTGCG
GGTATGGCAC CGATGCGCTC GCATATTTTC GATCAGCTAA AGAGTAAAAA GACCAAGCGT
AAGATGAGCT TCTGGTACGG CGCACGCTCA AGCCGCGAAG TGTTTTACCA GCAGGACTTC
GACACCTTGG CCGCCGAGAA CGACAACTTC GTCTGGCATG TGGCGTTGTC TGAGCCGCTG
CCAGAGGATA ATTGGACGGG TTACACTGGC TTTATTCATA ATGTGCTCTA TGAGAATTAT
CTTAAAAATC ACAAGGCACC AGAGGATTGT GAGTTCTATA TGTGTGGCCC ACCGATCATG
AACTCCTCGG TGATCCGTAT GCTCGAAAGC CTAGGGGTCG AGCCTGAAAA TATCCTGCTC
GATGACTTTG GTGATTAA
 
Protein sequence
MEMAIGIGMF TLVVCLLVIV ILIAKKKLVT TGEITIGIND DAEKSIKVAA GDKLLGALAS 
KNIFIPSACG GGGTCGQCRV KVKSGGGDIL PTEQGHITKK EAKEGCRLAC QVAVKTDMEL
ELEEEIFGVK KWQCEVISND NKATFIKELL LKLPEGEDVH FKAGGYIQIE APAHVVKYAD
FDIPAKYRDD WEKYGLFDLV STVNEDVLRA YSMANYPDEK GRIMLNVRIA TPPSANVPPG
KMSSYIFNLK AGDKVTISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF DQLKSKKTKR
KMSFWYGARS SREVFYQQDF DTLAAENDNF VWHVALSEPL PEDNWTGYTG FIHNVLYENY
LKNHKAPEDC EFYMCGPPIM NSSVIRMLES LGVEPENILL DDFGD