| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0744 |
|---|
| Symbol | |
|---|
| ID | 4251430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 865609 |
|---|
| End bp | 866466 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638117307 |
|---|
| Product | pirin domain-containing protein |
|---|
| Protein accession | YP_732881 |
|---|
| Protein GI | 113969088 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT TAGGTCAGTT TTCTGCTAAA CCTGCGATGG ATGGCGATGG GGTGAATATT
CGCCGTGTGG CGGACTTTAT CACGACCCAT TTTGATCCGT TTTTGATGAT GGATGAGATT
AAATCCGATG ATAAACAGGA TTTTATTGGT GGCTTTCCAC CGCATCCGCA CCGTGGGATG
GAGACCTTTA CTTACATCCG TAAGGGTGGG TTTGAGCATC GCGATCAGAT GGGTAACGTC
AAAGCGATTC GTGCTGGCGA TGTGCAGTGG ATGAGCACGG GTTACGGCGT GGTGCATTCT
GAAATGCCGT TGGCCGATGC GCTTAATGGT CTGCATGGCT TCCAAATTTG GGTCAATATG
CCTGCCAAGG ACAAACTGCG CCCCGCGACG TATCAGGATA CGGCTTCAAC CCCTAGCGTT
GAAACCACGA ACGACACAGG CGCCACCCTT AAAGCCTTGG CGGGGGATTG GGCTTTTGCG
GGTAAAAGCG CGATCAGTGC CACCATTCAA GGATTAGCGG GCGAGGCGGC GATTGCCGAC
TTGATGATTA ACGCCAATGG TGAGGCGCAG CTCGATTTAT CCAAGCATGA GTTTGCCGCC
CTCTATCTTT ACCAAGGTGG CTTGAGTAAA GGTGAAGGCT CGCAGTGGTC ATTCAATGAA
GGCCAGTTTT TAGTGCTCGA TAGCCAAACG CCATTGCAGC TCAAGGCCGA TGAACGCGGT
GCGGGCATGC TACTGTTTGT GGGTAAACCG ATTCGCGAAA AAATCGTCCA AATGGGGCCG
TTTGTGATGA ACACCCAAGC GGAAATTCAG CAGGCGATTC GCGATTATCA AGAGGGCCGC
TTTGGCAGTA TCGCCTAA
|
|---|
| Protein sequence | MKVLGQFSAK PAMDGDGVNI RRVADFITTH FDPFLMMDEI KSDDKQDFIG GFPPHPHRGM
ETFTYIRKGG FEHRDQMGNV KAIRAGDVQW MSTGYGVVHS EMPLADALNG LHGFQIWVNM
PAKDKLRPAT YQDTASTPSV ETTNDTGATL KALAGDWAFA GKSAISATIQ GLAGEAAIAD
LMINANGEAQ LDLSKHEFAA LYLYQGGLSK GEGSQWSFNE GQFLVLDSQT PLQLKADERG
AGMLLFVGKP IREKIVQMGP FVMNTQAEIQ QAIRDYQEGR FGSIA
|
|---|
| |