| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0738 |
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| Symbol | |
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| ID | 4251424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 858047 |
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| End bp | 859648 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117301 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_732875 |
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| Protein GI | 113969082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAATCA TAGATCCCAT AGTGACAGGC TTAAATTCCG GTTGGTTACA TACCGACGCC
AGTCAGCTGC AAGAAAACCA GCAATTTGAA GCCGATGTGG TGATTGTAGG CACGGGCGCA
GGCGGCGGTG TGGCGGCGGA GATCCTCAGC CAAGCGGGGC TTAGTGTGAT CATGATTGAA
GCGGGGCCGC TTAAATCCTC CAGCGACTTT AATATGGAGG AGCGGGTCGC TTACCCTAAT
TTGTATCAAC AGGCGGCCGC GATGAAAACC GCCGATAAGG CGATTGGGAT TTTTCAAGGT
CGCGCCGTGG GCGGCTCGAC CACCATCAAT TGGACCACCT CGATTCGTAC TCCTAAGGAA
GCCTTAGCCT TTTGGGCGCA GCATAAATCC GTTGCGGGTC TCGACCCCGA CGCTCTGGCC
CCTTGGTTCG AGCAGATGGA GCAGCGGCTT AATATTCATG AATGGAATTA TGAACCTAAC
CGCAATAATG GCGCCCTCAA GCAAGGCTGC ATCAACCTAG GTTGGGATTA CACTGTTATT
AAGCGTAACG TGGCGGGCTG TTGGAATACT GGTTATTGCG GCATGGGTTG CCCAGTCAAT
GCTAAGCAGT CGATGTTAGT GACTACGATT CCGACTGCAT TAGAGAAGGG CGCGCAGCTT
TTTAGCCGTG CCAAAGTCGT TAAGATTGAA CACCATAATG GCCAAGTGTT TGCCCTCAAG
GCGCAGGCGC TTGATGTTAA TTTACGGCCG ACGTCGGTCG AGCTGTTATT TAAAGCCAAA
CACTATATTT TAAGCGCTGG CGCTATCCAC ACGCCGACCT TGATGATGCG CTCCGACGTG
CCCGATCCCT ATCAGCTATT GGGCAAGCGT ACCTTTTTGC ATCCTACAGT GCTCTCTGGC
GGCGTATTTG CCGATGCCAT TAATGCCCAC AGTGGGGCGC CTCAATCTAT CTATTCCGAT
GAATTTGTTT GGAAAAATGG TGCCGATGGC GAGTTAGGTT ACAAGCTTGA GGTGCCGCCG
GTGCATCCGA TTTTGATCGC CTCTAAAACC TTAGGTTACG GCGCCAGCCA CGCCGAATTG
ATGGCGCAAT TTAATCAGCT ACAGGTCACT ATCGCCTTGA TCCGCGACGG TTATCATCCC
GATAGCCAAG GTGGGCAAGT GCATCTCACC TCGACGGGCT TTGCCTTAGA TTATCCGCTC
TCCGAGGCCT TTTGGCGTGC GGCGCGGCGG GCGTATGCCA GCATGGCCGA ATTGCAATTC
TCGGCGGGGG CATTAAAAGT GCTGCCCATC AGTGATGGCA TGCCTTATCT GTCGTCATGG
AAGGAGGCGA AAGAGAGCAT TGCGCAAATG GATTTAGCGC CGCTGCGGAC AATCGTCGCC
TCGGCGCACG TGATGGGCGG TTGCCCCTTT GGCGAGGATG AAAAGCTCTC TATGGTGAAT
AGCTATGGTC AGTCACATTA TCTGGATAAT CTGTCGGTGA TGGACGGTTC TATCTTCCCG
ACCAGTCTCG GGGCCAATCC GCAGCTGTCG ATTTATGGCA TTACCGCGCG CAATGCCACG
GCGCTGGCGC AAAAGCTGAC CGATGGCCGA GAGCCGCAAT AG
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| Protein sequence | MAIIDPIVTG LNSGWLHTDA SQLQENQQFE ADVVIVGTGA GGGVAAEILS QAGLSVIMIE
AGPLKSSSDF NMEERVAYPN LYQQAAAMKT ADKAIGIFQG RAVGGSTTIN WTTSIRTPKE
ALAFWAQHKS VAGLDPDALA PWFEQMEQRL NIHEWNYEPN RNNGALKQGC INLGWDYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PTALEKGAQL FSRAKVVKIE HHNGQVFALK
AQALDVNLRP TSVELLFKAK HYILSAGAIH TPTLMMRSDV PDPYQLLGKR TFLHPTVLSG
GVFADAINAH SGAPQSIYSD EFVWKNGADG ELGYKLEVPP VHPILIASKT LGYGASHAEL
MAQFNQLQVT IALIRDGYHP DSQGGQVHLT STGFALDYPL SEAFWRAARR AYASMAELQF
SAGALKVLPI SDGMPYLSSW KEAKESIAQM DLAPLRTIVA SAHVMGGCPF GEDEKLSMVN
SYGQSHYLDN LSVMDGSIFP TSLGANPQLS IYGITARNAT ALAQKLTDGR EPQ
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