| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0731 |
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| Symbol | |
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| ID | 4251767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 851713 |
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| End bp | 852417 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117294 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_732868 |
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| Protein GI | 113969075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000206265 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACTTTA GTCCAGCACT GAAACCGGGA AAGTTACTCA AACGCTACAA ACGTTTTCTC
GCCGATGTTC AACTCGAAGA CGGCACTGAA ATCACCCTGC ATTGTCCCAA TACCGGCTCA
ATGCGTAACT GTCTGTTCCC CGGCGAAACG GTGTGGTTTT CGACCTCAAA TAATCCTAAG
CGCAAGTACG CCCACACATG GGAGTTAATG GCCACGCCAA CGGGTGGCCT TATCGGCATT
CATTCGGGCA ATGCCAACGC CCTGGTCGAG GAAGCCCTTA ATAAAGGTAT CATCACTGAA
CTGACAGGTT ACGACAGCTT AAGTCGCGAG GTGAAGTATG GGGATGAGAA TAGTCGCATC
GATATTCTAC TGGAATCCGC TCAAAAACCC GCCTGTTATA TAGAAGTCAA AAGTTGTACT
TTGCTTGAAG ATGGTCAAGG CTATTTCCCC GATGCGGTGA GCCTTCGCGG CCAAAAACAT
CTACGGGAAT TAATGCATAT GGCGAGCCTT GGGCACAGAG CCGTATTGCT ATTTGTGGTG
CAACACACAG ACATCCACAG CGTGGCCCCC GCGGCACATA TCGACCCGGA ATATGCTAAC
TTATTGAAAA AAGCAATCTT ATCTGGCGTA GAAGTGTTAG CCTATCGCTG CGAAATCTCC
CCCGATGAGA TACATCTAGC CCAATCGTGT CCAGTCCGAG TATGA
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| Protein sequence | MHFSPALKPG KLLKRYKRFL ADVQLEDGTE ITLHCPNTGS MRNCLFPGET VWFSTSNNPK
RKYAHTWELM ATPTGGLIGI HSGNANALVE EALNKGIITE LTGYDSLSRE VKYGDENSRI
DILLESAQKP ACYIEVKSCT LLEDGQGYFP DAVSLRGQKH LRELMHMASL GHRAVLLFVV
QHTDIHSVAP AAHIDPEYAN LLKKAILSGV EVLAYRCEIS PDEIHLAQSC PVRV
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