| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0729 |
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| Symbol | |
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| ID | 4251765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 850071 |
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| End bp | 850970 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117292 |
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| Product | glutamyl-tRNA synthetase, class Ic |
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| Protein accession | YP_732866 |
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| Protein GI | 113969073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000294668 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCAA CTCACACCTT TGACACTTCA GCTTTGCGTC CCTATGTAGG TCGTTTTGCC
CCTTCGCCTT CTGGCGCGCT GCACTTTGGA TCGCTTATCG CTGCCCTTGG TAGTTATCTG
CGGGCGCGCT CCTTAGGCGG GAAGTGGTTA ATTCGTGTAG AAGATATTGA TCCTCCAAGG
GAAGTTGCTG GCGCTGCCGA TGATATTTTA CGTACCTTAG AGGCCTTCGG CTTCGAGTGG
GACGATGAAG TGTTGTATCA GAGTGACCGC ACCGAGGCCT ATCAAGCCAA GCTCGATGAG
TTACTCGCCG AGGATAACGC CTACTTTTGC CAGTGCAGCC GCAAACAGAT CCAAGCCATG
GGCGGAATTT ACGATGGCCG CTGCCATCGG TTAGCCACAC CGCATCAATC GGGCGCGATC
CGCATCGTGA ATCGTGCGCA AGTGGCCGAA TTTAGCGATA ATCTGATGGG AAAGGTCGTA
GTGGACCAAG CCTTTGCCGC CGAAGATTTT ATTATCAAAC GCAGCGATGG ACTTTATGCC
TATCAACTCG CCGTGGTGCT CGATGACGCC TATCAAGGCA TTACCGAAGT GGTGCGAGGT
TACGATTTAA TCGAAGCCAG TTGCCGCCAA TTAAGCCTAT ATCAAACCTT TGGCCTAAGC
GCGCCGCAGT GGCTGCATTT ACCCTTAGCC TGTTTGACGC CGGGATTTAA GCTATCGAAA
CAAAACCATG CGCAGGCTAT CGATAAACAG CATCCGCAGG CGAGTCTCAA TGCTGCCCTC
GCCTTTTTAG GCCAAGCGCC GGTGGAGCCG ACGACGGCGC CGCAAATGCT GGCCCAGGCA
GTGGCCCAGT TTCAGCCATC GGCTATCCCT AAACAGCGGG AAATCTTGAT AGCCCCTTAG
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| Protein sequence | MMATHTFDTS ALRPYVGRFA PSPSGALHFG SLIAALGSYL RARSLGGKWL IRVEDIDPPR
EVAGAADDIL RTLEAFGFEW DDEVLYQSDR TEAYQAKLDE LLAEDNAYFC QCSRKQIQAM
GGIYDGRCHR LATPHQSGAI RIVNRAQVAE FSDNLMGKVV VDQAFAAEDF IIKRSDGLYA
YQLAVVLDDA YQGITEVVRG YDLIEASCRQ LSLYQTFGLS APQWLHLPLA CLTPGFKLSK
QNHAQAIDKQ HPQASLNAAL AFLGQAPVEP TTAPQMLAQA VAQFQPSAIP KQREILIAP
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