Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0712 |
Symbol | |
ID | 4251153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 824282 |
End bp | 826951 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117275 |
Product | hypothetical protein |
Protein accession | YP_732849 |
Protein GI | 113969056 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTC CAGCATTAAC CCCTAAGGCA AGTGACAACA AAACCCCAAG CAGAAACCAC CCATGGCTGC GGATCTATTG GGTATTAAAG GTCTTTCTCG CCCATTATCG CCATGCGCCG CTACAAGCGG GCGCGATTTT GCTTGGACTT GCCCTCGCCG TGACTTTACT TATCGGGGTT AAAGCCACCA ATGATAATGC CATTCGTAGC TACAGTGAGG CCACAGAACT CTTGAGCCAG CGAGCCGATG TGCTCTTAAG CGCGCCCATT GGCCAAGAAA CCCTCGACGA ATCCGTGTAT TTCAGCCTGC GCCAAGCGGG CATAAGCCAA AGCCTTGCGG TTGTCAGTGG CAGAGTGGCG GGCCTGAACG GTCAGTTCTG GCAAATTGAA GGCAGTGATA TCGTCGCCGC GCTGACGGCA AGCCTAAGCT CAAAAGAGGG GCAAAAGCAC AACGCCAGCA CAAAGCAAGC AGCCAATCCT AGAATGTCGA TGGGAGCGAT GCCGCTCGCC GAGTTAATGA GTGGTGAGCC GATAGTGGTT ATGAGTCAGA GCCTTGCCAA TAAGATCGCG CCCAATGGCC AACTCGACCT CGCGCCCGCG TCTTTTGCAC CAGACAAGCT TAAGGTCATT AGTATCGATG ATAGCTGGGG GCTGGGCAGT GCGATTCTGA CCGATATTTC CCTCGCCCAA AGCTTACTCG GGATGCAAGG TAAACTCAGC TATATCGCCC TATTCAGTGA CAGGGATAAG CTCCCCGCCT TAAAGCAGCG GCTCGATACC TTAGGCATTA CGCCGCTTCG CGCCAGTTAC AGTCAACAGG ATCAAGGCCA AGCCTTGATG GCGCTTACCC GCAGTTTTCA TTTAAACCTC AATGCGATGA GCATGTTAGC CTTTGTGGTC GGACTGTTTA TTGCCTATAA CGGTGTACGT TACAGCCTGA TGAAACGCCA ACGTCTATTA ATCCAATTGC TGCAACAGGG CTTAGCGCGG CGCGAAGTTA TGCTTGCCCT GCTTGGCGAG TTACTACTGT TGGTGGTGCT AGGCTCGCTA ATGGGATTTA TCTTAGGATT ACAGCTCAGT CACTGGTTGC AACCTATGGT CGCTATGACC TTAGAGCAAC TCTACGGCGC CCACTTGTTG CCGGGGATTT GGCAATGGCG TTGGTTAGCC GAGGCGATAG CCCTCACTTT AGTCGCCGCC CTGGCCGCCT GTTTACCCTT GTATTTTGAC TTAACCCGCC AATCCCTCGC CCAAGGCGCT AATCGTTATC AACAAACGCA AGCTCACAAC AAAACCCATG GCAGGCAGTT TATCTTAGCC TGCGGCCTAC TCACGCTCGC CGCAATACTC ATGCCCTTCA GCCAAAGCTA TAACACCAGT TTGGTATTGC TGGGCATGGT CGCCGTCGCG ATTCCATTGT TATTACCGCA AGTATTGCAT TGGGGCATCA GCTTGCTGCT GCCATTGACT CGCCCCGGAC TTAAGCACTA TCTCCTTGCC GAAACCCGCG AGCTTATCGC GCCATTGTCC CTCGCCATGA TGGCGATACT GCTGGCACTG AGCGCCAATG TGTCGATGAA CACCTTAGTC GGTAGCTTCG AGCAAACCTT AAGAAGCTGG TTAGAAACCC GTCTGCATGC CGATTTTTAC CTGCGCCCCA GCGCCAACCA TATGGCCGAA GTGCGCGATA AATTAAGCCA AGATCCTCGC CTGAGTGGCC TGTATCAGCA ATGGCAAGTG GAGGCCGAAG TATCACTCCA AGGGGCGGCA CAAACTATCC CAGTCAACCT GATTAGCCGC GATGATGCAT CGATTCAACA CACCAGCACA CTCAAACAAA GCTTGCCGGA TCTCTGGCAA ACCTACTTTG AAGGGCGCTA CGTGTTAGTC AGCGAACCCA TGGCCATTAA GTATCAACTG CAACTCGGCG ATAGTTTGGC GTTAAATGTG CTAGACAAAA CCGCCAATAA TCCCGTGGTG ATCGCAGGTA TCTACTACGA CCATGGTAAT ACCCGTAATG AGCTCATCAT CAGCCATGAG CTATGGCAAC GGGCGCAGCT ACCCGTGTTA CCCATTAGCC TTGCGGCCAG TTTCCACTCT GTCGAGCCAG AAGAGCAAAC CACAGCGACT CACCTCAAAC TCAGCGAGGC TGAGCTCGAT GACCTGCAAG GGCAATTGGC CGTCACATTG GGTTTAGCGC AGGCGCAAAT TTACAGCCAA GCCAAGATCA AGGCTCAGGC CATTGCCATG TTTAAACGTA CATTCTCAAT CACCTTAGTG CTCAATAGCT TAACTTTGCT GGTGGCGGCC ATAGGGCTAT TTAGCGCCTG CTTGATGTTA ACTCAATCCA GGCAAGCGCC ATTGGCGAGG CTGTATTCCC TCGGGGTAAG TCGTAACCAA TTGCGGACTA TGGTGTTCAG CCAAATGCTG CTAGTCGTGG TCATCACTTG CCTGATGGCC ATGCCCACAG GCGCGCTGCT CGGCTATTTA TTAATTGATA AAATCACCCT GCAGGCCTTC GGCTGGACAA TCAAGATGAT ATGGGATTGG TTCGCCTATG GAAAAGCCAT CCTCATTGCC TTAGTGACCT GCACCTTAGC CGTACTCTTA CCGCTTTACT GGCAAACCCG CAGGCCCTTA ATCGCCAGTT TGCAGCAGGA AACCCTATGA
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Protein sequence | MMSPALTPKA SDNKTPSRNH PWLRIYWVLK VFLAHYRHAP LQAGAILLGL ALAVTLLIGV KATNDNAIRS YSEATELLSQ RADVLLSAPI GQETLDESVY FSLRQAGISQ SLAVVSGRVA GLNGQFWQIE GSDIVAALTA SLSSKEGQKH NASTKQAANP RMSMGAMPLA ELMSGEPIVV MSQSLANKIA PNGQLDLAPA SFAPDKLKVI SIDDSWGLGS AILTDISLAQ SLLGMQGKLS YIALFSDRDK LPALKQRLDT LGITPLRASY SQQDQGQALM ALTRSFHLNL NAMSMLAFVV GLFIAYNGVR YSLMKRQRLL IQLLQQGLAR REVMLALLGE LLLLVVLGSL MGFILGLQLS HWLQPMVAMT LEQLYGAHLL PGIWQWRWLA EAIALTLVAA LAACLPLYFD LTRQSLAQGA NRYQQTQAHN KTHGRQFILA CGLLTLAAIL MPFSQSYNTS LVLLGMVAVA IPLLLPQVLH WGISLLLPLT RPGLKHYLLA ETRELIAPLS LAMMAILLAL SANVSMNTLV GSFEQTLRSW LETRLHADFY LRPSANHMAE VRDKLSQDPR LSGLYQQWQV EAEVSLQGAA QTIPVNLISR DDASIQHTST LKQSLPDLWQ TYFEGRYVLV SEPMAIKYQL QLGDSLALNV LDKTANNPVV IAGIYYDHGN TRNELIISHE LWQRAQLPVL PISLAASFHS VEPEEQTTAT HLKLSEAELD DLQGQLAVTL GLAQAQIYSQ AKIKAQAIAM FKRTFSITLV LNSLTLLVAA IGLFSACLML TQSRQAPLAR LYSLGVSRNQ LRTMVFSQML LVVVITCLMA MPTGALLGYL LIDKITLQAF GWTIKMIWDW FAYGKAILIA LVTCTLAVLL PLYWQTRRPL IASLQQETL
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