Gene Shewmr4_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0711 
Symbol 
ID4251152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp823035 
End bp824285 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content50% 
IMG OID638117274 
Producthypothetical protein 
Protein accessionYP_732848 
Protein GI113969055 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC GCGTACCTCA AACCAAGACT TGGCACCTTA ATCCATTAGC GTCTGCAACG 
CGATTTAAGA TCAGTACAAG CGCAGGCTTT ATTTTGAAGA GTGCCATAGG TGGCTTACTG
CTTGCGACAA TAAGCGGCTG CGATAAAGCG CCTTCAACGA CCGAGCCTCA ATCCATGGGG
ACTTTACTGG GGCAAGCAAG CGCTGATAGC CAAAGCTTTG CCAAGGTGAC GCCAGGAAAC
CACTTTCAAT TTCCTCAAGA TCACCTCGCC CATCAGGATT TTCGTCAGGA ATGGTGGTAT
CTCACAGCTA ATTTAACCAC TGAGAATGGT GAGCAACTTG GCGCCCAATG GACGCAATTT
AGGGTAGCGC TAAAACCTAA GCACACTGAA CCGCAAAACG TGGAACCTAA TCCTAAGTCC
ACTTGGGCGA CGGATCAGCT TTATTTTGCC CACAGCGCAC TCACCTCCAG CACTTTTCAC
CTCGCCCATG AAAAATGGTC GCGGGCGCAT CGATTACTTG CAGGGGTAAG CGCAGATCCC
TACCAAATTC ACCTCGATAA TTGGCAATGG CGTAGTCAGT CAAATGAGTT GTTCCCTGCA
ACCTTGAGCG TTGCAAACGA CGACTTTAGT TATCAACTCG AGCTTAACAG CCAAGCACCA
CTGCAATATC AAGGGGATAA GGGTTACAGC ATTAAGAGTC GCGACAGCAA AGTCGCCTCT
TACTACTACA GCCAACCCTT TATCACGATT CACGGCGAAA TCACCCGCCA TATCAAGATT
AATGGCCAAG TGGAAAACCG CGTCGAAAAA GTCACAGGTC AAGGCTGGCT AGATAGAGAA
TGGAGCTCGC AGTTTTTAAA TAAGAGCCAG CAGGGCTGGG ATTGGTTTGC TCTTAGGTTA
GATGATGGTT CGGCGCTGAT GCTATTTCAG CTCAGGGAAC AATCCTCCGA TAAAGCGCAA
TCCGCCTTTT ACAGCGCCAG ACGAATGTTT GCCGATGGTA CCGGACGCAA CATCAATTCC
CGCGACACCC CCGATGGGAT AAAAATGACG ACACTCGAGT GGCAAACCAC CAGCACGGGG
AAATACCCCG TTAGCTGGCA AGTGCAAATT CCGAGTGAAC AAATCGACAT TAACATCTCA
CCCTTAAACC CCAATAGTGC CATGGCGTTA TCCACCCAGT ATTGGGAAGG CCCAATTGAG
CTTAGCGGCA GTCATAGCGG CACGGGTTAT ATGGAGCTAA CGGGCTATTA A
 
Protein sequence
MSARVPQTKT WHLNPLASAT RFKISTSAGF ILKSAIGGLL LATISGCDKA PSTTEPQSMG 
TLLGQASADS QSFAKVTPGN HFQFPQDHLA HQDFRQEWWY LTANLTTENG EQLGAQWTQF
RVALKPKHTE PQNVEPNPKS TWATDQLYFA HSALTSSTFH LAHEKWSRAH RLLAGVSADP
YQIHLDNWQW RSQSNELFPA TLSVANDDFS YQLELNSQAP LQYQGDKGYS IKSRDSKVAS
YYYSQPFITI HGEITRHIKI NGQVENRVEK VTGQGWLDRE WSSQFLNKSQ QGWDWFALRL
DDGSALMLFQ LREQSSDKAQ SAFYSARRMF ADGTGRNINS RDTPDGIKMT TLEWQTTSTG
KYPVSWQVQI PSEQIDINIS PLNPNSAMAL STQYWEGPIE LSGSHSGTGY MELTGY