| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0708 |
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| Symbol | |
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| ID | 4251149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 821613 |
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| End bp | 822011 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117271 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_732845 |
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| Protein GI | 113969052 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTGA GTGAGAAACA ACAAGGCTTT ACCATGACCG AAGTGCTGAT TTCATTAGTG
GTTTCGGTCA CTTCGTTGCT GGCGCTCGGC AAAGCTCAGC TATCTTCATT GCAGCATGCG
ACCAATAGCT TCCAGTATAC GGTCGCCACC ATTCAAGCGC AGAATGCCAT TGAAAGGATC
TGGCCGAGGA TCTGCGATAT TCAGCGCCAA CCCGCACGCT TTGAGGATGT CAATTTTAGG
GCCAGCCTCA GCCAAGATAT GCCCAGCGGT TACAGCTTAG TGTTACCGAA CACTTATCAA
GACACTATGC CCATCACTGT GACTTGGCAG GACGGCCGCA TTGAGGACAA TAACAGTGTG
AGCCTCAACG CCAGCTTTCC GCACTTATGT CAGGTGTAG
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| Protein sequence | MVLSEKQQGF TMTEVLISLV VSVTSLLALG KAQLSSLQHA TNSFQYTVAT IQAQNAIERI
WPRICDIQRQ PARFEDVNFR ASLSQDMPSG YSLVLPNTYQ DTMPITVTWQ DGRIEDNNSV
SLNASFPHLC QV
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