| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0704 |
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| Symbol | |
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| ID | 4251145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 816425 |
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| End bp | 818905 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117267 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_732841 |
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| Protein GI | 113969048 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTA GCCGCCGCGA GTTTCTCAAG GCTAACGCAG CGGTTGCCGC TGCCACAGCC
GTTGGCGTCA CGCTTCCCGT GAAGATGGTC GAAGCCGCCG AGTCAGATAA TATTAAGTGG
GATAAAGCGC CCTGCCGTTT TTGCGGTGTG GGTTGTAGCG TATTAGTTGG TACCAAAGCG
GGTAAAGTGG TCGCCACTAA GGGCGATCCT GAAAGCCCTG TTAACCGTGG TTTGAACTGT
ATTAAGGGTT ACTTCCTGTC GAAAATCATG TACGGCAAGG ACAGATTAAC CACGCCGCTG
CTGCGGATGA AAGAGGGCAA ATACCACAAA GAAGGCGAAT TTACCCCAGT TAGCTGGGAT
GTCGCCTTAG ATACTATGGC CGCTAAGTGG AAACACAGCA TCGCCACTAA GGGACCAACC
TCAGTCGGTA TGTTCGGTTC TGGCCAATGG ACCATTTGGG AAGGTTATGC CGCCTCTAAA
TTACATAAGG CCGGTTTCCT CACTAACAAT ATCGACCCTA ATGCCCGCCA TTGTATGGCA
TCGGCCGTAG GTGGCTTTAT GCGTACCTTC GGTATCGACG AGCCTATGGG TTGTTACGAT
GACTTAGAAG CCGCCGATCA CTTTGTGCTC TGGGGCGCCA ACATGGCCGA GATGCACCCG
ATCCTGTGGG CGCGTTTATC CGACCGCCGC TTAAGCCACA AAGACTGCCG CGTACACGTA
CTCTCCACCT TCGAGAACCG CAGCTTCGAC TTAGCGGACA ACCCTATGGT GTTCCGCCCA
CAGTCAGACT TAGTGATCCT CAACTTTATT GCTAACTACA TCATTCAAAA CAAAGCCGTG
AATACCGACT TTGTGACTAA GCATACTAAG TTTGCCCTTG GTGTGGATGA TATCGGTTAT
GGCCTGCGTC CAGATCATCC GTTAGAGAAG AAAGCTAAAA ACCCAGGCAA TGGTAAATCC
AGCCCTATCA GCTTCGAAGA ATACGCTAAG TTCGTCAGCA CTTATACGCT GGAATATGCG
GCGAAGATGA GTGGTGTAGA GCCTGAAAAA TTAGAAACCT TAGCTAAGGC CTATGCCGAT
CCTAAGGTAA AAGTCATGAG TCTGTGGACC ATGGGGATCA ACCAACACGT ACGTGGCGTA
TGGGCAAACA ACATGCTCTA CAACATCCAC TTACTCACAG GTAAAATCGC CACCCCAGGT
AACAGCCCAT TCTCATTAAC GGGTCAACCT TCGGCCTGTG GTACTGCCCG TGAAGTCGGT
ACCTTCGCCC ACCGCTTACC TGCAGATATG GTAGTGGCTA ACGATGCACA CCGCGCCATC
ACCGAAAAAG TGTGGCAGGT ACCAGAAGGC ACCATTCCGC CAAAACCTGG CTTCCATGCC
GTGCTGCAAA GCCGCATGCT CAAAGACGGT AAACTCAACT GCTATTGGAC CATGTGTACC
AACAATATGC AGGCGGGTCC GAATATCAAC GATGAAATCT ACCCAGGTTT CCGTAACCCA
GAAAACTTTA TCGTGGTATC CGATCCATAC CCAACCGTCA CCGCCATGGC CGCCGACTTA
ATCCTGCCTA CCGCCATGTG GGTAGAAAAA GAAGGAGCCT ATGGTAACGC CGAGCGCCGC
ACCCATATGT GGCATCAACA GGTCAAAGCG CCAGAAGGGG CTAAATCGGA TCTGTGGCAA
TTAGTCGAGT TTTCAAAACG CTTTAAAGTG TCTGAAGTGT GGCCTGCTGA GCTTATCGCC
AAGCAACCTG AATACGCTGA CAAAACGCTT TATGAAGTGC TGTTTGCCAA CGGCGTCATC
AACAAGTTCC CGACCACAGA TTGTAAGGGC GACTTAAACG ATGAAAGCGC GCACTTTGGC
TTCTATCTAC AAAAAGGCAT TTTCGAAGAA TACGCCGCCT TCGGTCGCGG CCATGGCCAT
GACTTAGCCG ACTTCGACCG TTACCACGAA ACCCGCGGCC TACGCTGGCC TGTGGTTGAG
GGCAAAGAAA CCCTGCGCCG CTTCGTTGAA GGTAGCGATC CTTATGTGAA GGCAGGTGAA
GGCTACAAGT TCTACGGTAA ACCCGATGGC AAAGCGGTGA TTTTCGCCCT GCCCTACGAG
CCTGCAGCAG AAGAGCCAAA TGAAGAATAC GATCTGTGGA TGTCTACCGG CCGTGTACTC
GAACACTGGC ATACAGGTTC GATGACCGCC CGTGTACCTG AACTGTACCG CGCTTACCCC
GATGCACAAA TCTTTATGCA TCCTGAAGAC GCTAAGGCCC GTGGTCTGCA ACGTGGTGAT
GAAGTGCTAG TCGCATCCCC CCGTGGTGAG GTCAAAACCC GTGTCGAAAC CAAAGGTCGT
AACAAACCGC CACGCGGCGT GGTGTTTATG CCCTTCTTCG ATGCGCGTCA GTTAGTTAAT
AAGTTGATTC TGGATGCAAC CGATCCACTG TCAAAAGAAA CTGACTTTAA GAAGTGTCCC
GTTAAAGTGA TGAAGGCCTA A
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| Protein sequence | MSISRREFLK ANAAVAAATA VGVTLPVKMV EAAESDNIKW DKAPCRFCGV GCSVLVGTKA
GKVVATKGDP ESPVNRGLNC IKGYFLSKIM YGKDRLTTPL LRMKEGKYHK EGEFTPVSWD
VALDTMAAKW KHSIATKGPT SVGMFGSGQW TIWEGYAASK LHKAGFLTNN IDPNARHCMA
SAVGGFMRTF GIDEPMGCYD DLEAADHFVL WGANMAEMHP ILWARLSDRR LSHKDCRVHV
LSTFENRSFD LADNPMVFRP QSDLVILNFI ANYIIQNKAV NTDFVTKHTK FALGVDDIGY
GLRPDHPLEK KAKNPGNGKS SPISFEEYAK FVSTYTLEYA AKMSGVEPEK LETLAKAYAD
PKVKVMSLWT MGINQHVRGV WANNMLYNIH LLTGKIATPG NSPFSLTGQP SACGTAREVG
TFAHRLPADM VVANDAHRAI TEKVWQVPEG TIPPKPGFHA VLQSRMLKDG KLNCYWTMCT
NNMQAGPNIN DEIYPGFRNP ENFIVVSDPY PTVTAMAADL ILPTAMWVEK EGAYGNAERR
THMWHQQVKA PEGAKSDLWQ LVEFSKRFKV SEVWPAELIA KQPEYADKTL YEVLFANGVI
NKFPTTDCKG DLNDESAHFG FYLQKGIFEE YAAFGRGHGH DLADFDRYHE TRGLRWPVVE
GKETLRRFVE GSDPYVKAGE GYKFYGKPDG KAVIFALPYE PAAEEPNEEY DLWMSTGRVL
EHWHTGSMTA RVPELYRAYP DAQIFMHPED AKARGLQRGD EVLVASPRGE VKTRVETKGR
NKPPRGVVFM PFFDARQLVN KLILDATDPL SKETDFKKCP VKVMKA
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