Gene Shewmr4_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0698 
Symbol 
ID4251542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp810634 
End bp812727 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content46% 
IMG OID638117261 
Productelongation factor G 
Protein accessionYP_732835 
Protein GI113969042 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000926499 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TATCCAAATA CAGAAACATT GGTATCTTCG CTCACGTTGA CGCGGGTAAA 
ACCACGACCA CCGAGCGCAT TCTTAAGCTA ACTGGTAGAA TTCACAAAGC TGGTGAAACC
CACGATGGTG AATCTACAAC AGACTTCATG GTTCAGGAAG CTGAGCGCGG TATTACTATC
CAATCAGCAG CAGTAAGCTG TTTCTGGAAA GACCACCGTT TCAACGTTAT CGACACCCCT
GGGCACGTTG ACTTCACCGT TGAAGTTTAC CGTTCTCTGA AAGTGCTTGA CGGCGGTATC
GCTGTATTCT GTGGTTCTGG TGGTGTTGAA CCTCAATCAG AAACTAACTG GCGCTATGCT
AACGAATCTG AAGTTGCTCG TATCATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC
TTCTTACGTG TTGTTAAGCA AACTAAAGAC GTTTTAGCTG CTACACCATT GGTTATGGTT
CTGCCTATCG GTATTGAAGA CGAGTTCAAA GGTGTTGTTG ACCTGTTAAC TCGCCAAGCT
TACGTGTGGG ATGAAACTGG TTTACCAGAA AACTACTCTA TCCAAGAGAT CCCTGCTGAC
ATGGTTGACT TAGTTGAAGA ATACCGTGAA CAGCTGATCG AAACTGCTGT TGAGCAAGAT
GACGATCTGA TGGAAGCTTA CATGGAAGGC GAAGAGCCAT CTATTGAAGA CCTGAAGCGT
TGTATCCGTA AGGGTACTCG TACTATGGCA TTCTTCCCAA CATTCTGTGG TTCTGCGTTC
AAGAACAAAG GTATGCAACT GGTTCTAGAC GCTGTTGTTG ACTACCTGCC AGCACCAAAC
GAAGTTGATC CACAACCTTT AACTGACGAA GAAGGCAACG AAACTGGCGA ATACGCAATC
GTTTCTGCTG ACGAGTCATT AAAAGCATTA GCATTCAAGA TCATGGACGA CCGTTTCGGC
GCCCTGACCT TCGTACGTAT TTACTCTGGT CGCCTGAAGA AGGGTGATAC CATTCTTAAC
AGTGCAACTG GTAAGACTGA GCGTATCGGC CGTATGTGCG AAATGCTTGC AAACGATCGT
ATCGAAATTG AATCAGCTGA AGCTGGTGAC ATTATCGCTA TCGTGGGTAT GAAGAACGTA
CAAACTGGTC ACACTCTGTG TGATGTTAAG TATCCATGTA CTCTGGAAGC CATGGTGTTC
CCAGAGCCAG TTATCTCTAT CGCAGTAGCG CCAAAAGATA AAGGCGGCAG CGAGAAGATG
GCTATCGCTA TCGGTAAGAT GATCGCAGAA GATCCATCAT TCCGCGTAGA AACTGACGAA
GATTCAGGTG AAACCATCCT TAAAGGTATG GGTGAACTGC ACTTAGACAT TAAAGTGGAC
ATCCTGAAGC GTACTTACGG TGTTGAGCTG ATCGTGGGTG AACCACAAGT AGCATACCGT
GAAACCATTA CTCAAATGGT TGAAGACCAA TACACCCACA AGAAACAATC TGGTGGTTCT
GGTCAATTCG GTAAGATCGA ATACATCATC CGCCCAGGTG AGCCAAACTC TGGCTTCGTG
TTCAAGTCTT CAGTTGTTGG TGGTAACGTT CCTAAGGAAT ACTGGCCAGC AGTTGAGAAA
GGCTTCGCGA GCATGATGAA CACTGGTACT ATCGCTGGCT TCCCAGTGTT AGACGTTGAG
TTCGAACTGA CTGACGGTGC TTACCACGCA GTTGACTCTT CAGCAATCGC GTTCGAAATC
GCTGCTAAAG CGGCATTCCG TCAGTCTATT GCTAAAGCTA AACCACAACT GCTTGAGCCA
ATCATGAAAG TTGACGTGTT CAGCCCAGAT GACAACGTTG GTGACGTAAT CGGTGACTTA
AACCGTCGTC GCGGTATGAT CAAAGACCAA GTTGCTGGTG TAACTGGTGT TCGCGTTAAG
GCTGACGTTC CGTTATCAGA AATGTTCGGT TACATCGGTA CTCTGCGTAC AATGACTTCA
GGCCGTGGTC AGTTCTCTAT GGAGTTCTCA CACTACAGCC CATGTCCAAA CAGCGTTGCG
GACAAAGTTG TTGAACAAGT TAAAGAGCGT AAAGCTGCAG AAGCTAAGAA GTAA
 
Protein sequence
MTELSKYRNI GIFAHVDAGK TTTTERILKL TGRIHKAGET HDGESTTDFM VQEAERGITI 
QSAAVSCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI AVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTKD VLAATPLVMV LPIGIEDEFK GVVDLLTRQA
YVWDETGLPE NYSIQEIPAD MVDLVEEYRE QLIETAVEQD DDLMEAYMEG EEPSIEDLKR
CIRKGTRTMA FFPTFCGSAF KNKGMQLVLD AVVDYLPAPN EVDPQPLTDE EGNETGEYAI
VSADESLKAL AFKIMDDRFG ALTFVRIYSG RLKKGDTILN SATGKTERIG RMCEMLANDR
IEIESAEAGD IIAIVGMKNV QTGHTLCDVK YPCTLEAMVF PEPVISIAVA PKDKGGSEKM
AIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVEL IVGEPQVAYR
ETITQMVEDQ YTHKKQSGGS GQFGKIEYII RPGEPNSGFV FKSSVVGGNV PKEYWPAVEK
GFASMMNTGT IAGFPVLDVE FELTDGAYHA VDSSAIAFEI AAKAAFRQSI AKAKPQLLEP
IMKVDVFSPD DNVGDVIGDL NRRRGMIKDQ VAGVTGVRVK ADVPLSEMFG YIGTLRTMTS
GRGQFSMEFS HYSPCPNSVA DKVVEQVKER KAAEAKK