| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0697 |
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| Symbol | |
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| ID | 4251541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 808736 |
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| End bp | 810184 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117260 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_732834 |
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| Protein GI | 113969041 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000140018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGCA GATTCTGGGT TTTATTCTTC TGTTTATGCT CACCTTTATG TGTCAATGCC
GAGCGCTTGG CCTCATACCT CAATGCTGCA GACGATCTCA GCAGTGCCAC CCAATTAATT
CGTTATTGCG TCGATCCCGA TTGGTTACCC TATGAAGCGA TTCGTGATGG TCAACATGTT
GGGATTTCGT CGGATTATAT TCGTTACATC GAATCCCATT CATCGTTAAA GTTTAGTCTG
GTACCTACCA CCTCTTGGAC ACAAACCTTA GATTTTCTGC AAACGGGACG CTGCAATTTA
ACTCCGCTAC TCAATAAGAC TGTGACTCGG GAGCAGTTTT TGCATTTTAG CCATGTGTAT
TTTCGTTCCC CCAATGTATT GGTCTCTCTC AAGGACCAGC CCTTTTTGCA AGGGTTTGAA
AACATCGGTC CGCGCACCTT GGCGGTGCCT GATGGCTATC GTCTCGCCGA ATATATTCAG
CATTACTATC CCAAGGTTCG CACTATTACA GTGGCGAGCG AGCCTGCGGG GCTTGAGGCT
GTGCTTGAGA AAAAAGTCGA TCTCTTTGTG GGGTCGATGT TTTCCGTCAA TGCCTATATT
CAGCAGACGG GATTCAATCA CCTAAAAATT GCCGGTTGGG GTGGCCCGGA GGATGAACTG
CGGGTGGGGG TGAGCGCTGG ACATGAGGCG CTGCTGCCAT TAATCAATCA AGTGCTAGAC
AATGTAGATG AGCTGGAGCG GATCAGGATT TACCAGAAAT GGAACAACAT CACTATCATC
GATGAAACCA ACTACTTACT TATCTATCAA GTGATTGCGG CGACACTGTT AGTCGTGTGC
CTACTGGTAA CGCGCACTTA TATGATCAGT CGTTACAATC GCCGACTAAC CGATAAAAAC
CAGCAGCTTG AAGAATTGCG TTTGCAGTTA GAGCAAAGCA ATACCGAGCT TGAGTTTTTA
TCTACCCATG ATCCGCTCAC GAAACTCTAC AATCGGCATT ACTTTAATCG ACAATTTGTC
CATGAACACC GCGCCGCCGC TTCCACGCAA GGGGCCATTT GCTTGGTGAT GTTAGATATC
GATTTCTTTA AAGAGATCAA TGACACCTTA GGCCATTCCG TTGGGGATAC TATTTTGATG
GAGTTGTCCT CTGTGTTGCA GCATTGTGTG CGTGAAAGCG ATGTGGTTGC GCGTTGGGGC
GGGGAAGAGT TTGTGATCCT CTGCCATAAC ACCTCGCTCG AGGCCGTTAA GTCTCTGTGT
CAGCGGATTG CAACAGCCAT CAAAGATAAC CATTTCAGTG GTGATGTGCG CCTGACTTGT
AGTTTTGGGA TTGCCAAACT CGCTGCAAAT GAGCCGATGC AATCTTGCTT CGAACGGGCA
GATAAGGCGC TATATCAGGC AAAAGCACAG GGGCGGGATC AGATTTGTGT CGGTGAAACT
CACCTTTAA
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| Protein sequence | MGCRFWVLFF CLCSPLCVNA ERLASYLNAA DDLSSATQLI RYCVDPDWLP YEAIRDGQHV
GISSDYIRYI ESHSSLKFSL VPTTSWTQTL DFLQTGRCNL TPLLNKTVTR EQFLHFSHVY
FRSPNVLVSL KDQPFLQGFE NIGPRTLAVP DGYRLAEYIQ HYYPKVRTIT VASEPAGLEA
VLEKKVDLFV GSMFSVNAYI QQTGFNHLKI AGWGGPEDEL RVGVSAGHEA LLPLINQVLD
NVDELERIRI YQKWNNITII DETNYLLIYQ VIAATLLVVC LLVTRTYMIS RYNRRLTDKN
QQLEELRLQL EQSNTELEFL STHDPLTKLY NRHYFNRQFV HEHRAAASTQ GAICLVMLDI
DFFKEINDTL GHSVGDTILM ELSSVLQHCV RESDVVARWG GEEFVILCHN TSLEAVKSLC
QRIATAIKDN HFSGDVRLTC SFGIAKLAAN EPMQSCFERA DKALYQAKAQ GRDQICVGET
HL
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