| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0695 |
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| Symbol | |
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| ID | 4251539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 802954 |
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| End bp | 803865 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117258 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_732832 |
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| Protein GI | 113969039 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000273507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.730196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATT TAAACGGTAT GATGCTATTT GCAGCCGTAG TTAGAGCGAA GGGATTCTCC
CAAGCTGCAC GTGAAACCGG CCACCCAAAA TCCACCATAA GTCGCAAAAT CGCGCAGCTC
GAAGAAGAAC TTGGCGTGCG ATTATTACAA CGCGACACCC GCAACTTAAG CCTTACTCAA
GTCGGGGCCC TCTTTTATCA ACACTGTGAT TCCATTCGCA ATGAGGTGGA AGCGGCCAAG
GCTGTTATCG AGAGTACCCA TGATGATGTG TCAGGATCAT TACGGATAGC TATTCCAGTC
TCTTTTAGCC AAGAATTAAT CGCTAACCTC TGTAGCGGAT TCATGCGTTT ATATCCCAAT
GTGGAATTAG ATGTCCAGTT TACCGACAAT GATATCGGTT TAGTGGGTGA AGGATATGAC
ATAGCTATCA AATATGGGCC ACTGCAATCC TCTGATCTTG TTGCAAGATT ACTGTTCGAG
CGCCAACCCA TTCTCGTGGC AAGCCCGGCC TATTTAAAAG CCCGAGGCAC GCCTGCAACC
CCCAAGGAAT TAAGTGAGCA CAGTGGCATC TTACTCGGGA CATCACGCTC TGCGCCCATT
TGGCCCCTCG GTAAAGGCGC ACGTAAGACC ATGGTGAATT TTCAACGTAA GGTTAGGGTT
AATAGCCCTA TTATGGTCAA GCAGTTAGCC CTCGATGACT TTGGTATTGC CATGCTGTCC
AACTCCGCCT GCAAGACGGA GTTGGCGAAT GGTCAACTGG TTCCCATACT ACAAGAATGG
CCAATCGAAC CCTTTAAGGT CTATGGGGTG TATTCGAGCC GTCGCCAATT AGCCACTAAT
ATCAGTGCCT TCTTGGACTT TTTCGTCAAA CGCTTTAGTA GCCAAGAAAG CCTGCAATCC
TTGATGGGCT AA
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAARETGHPK STISRKIAQL EEELGVRLLQ RDTRNLSLTQ
VGALFYQHCD SIRNEVEAAK AVIESTHDDV SGSLRIAIPV SFSQELIANL CSGFMRLYPN
VELDVQFTDN DIGLVGEGYD IAIKYGPLQS SDLVARLLFE RQPILVASPA YLKARGTPAT
PKELSEHSGI LLGTSRSAPI WPLGKGARKT MVNFQRKVRV NSPIMVKQLA LDDFGIAMLS
NSACKTELAN GQLVPILQEW PIEPFKVYGV YSSRRQLATN ISAFLDFFVK RFSSQESLQS
LMG
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