Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0692 |
Symbol | |
ID | 4251536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 799557 |
End bp | 800162 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638117255 |
Product | hypothetical protein |
Protein accession | YP_732829 |
Protein GI | 113969036 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000345273 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.666966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACC CGAGATCCCT ACTCAATAGC CTGCGCCGTA AAGCCATCTC ATCCACGAGT ATCACCTCAG CAACGGCGGC TAACTCGGCC ACGCCACAAC GCCAGCCAAA GCCACTGACA CCCCTGCAGC AACAAATCTT GGTACGCATC GAAGACTGTT ACCAGCAGGC GGAAATCTAC TTCAAGCGTC CATTTGCGCG GCCGCTAACT CAATTTACCC TGCGGGGACG GAGTGCGGGC ACGGCCCATT TGCAACAGAA TCGCCTACGA TTTAATTCCG TATTACTCAG GGAAAATAGC GAAGCCTTTT TAGCCGAAGT GGTGCCCCAC GAAATAAGCC ATTTGCTCTG TTTCCAACTC TTTGGCAAAA CCAAACCCCA TGGCCGCGAG TGGCAATCCA TCATGCTCAA GCTGTTCAAG GTGAGCCCCA ATACCACCCA CAGTTTCGAT ACTCAGTCGG TTAAAGGGAA AGACTTTGAA TACCGCTGCG CCTGCGGCCC GATTCGGCTG AGCATCCGTC GCCATAATAA AGTGTTGCGT GGTGAGACCC GTTATCTATG CAAACGCTGC CATACCCACC TCACCTTTAC CGAAGCCGCC GAATAA
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Protein sequence | MFNPRSLLNS LRRKAISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNSVLLRENS EAFLAEVVPH EISHLLCFQL FGKTKPHGRE WQSIMLKLFK VSPNTTHSFD TQSVKGKDFE YRCACGPIRL SIRRHNKVLR GETRYLCKRC HTHLTFTEAA E
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