| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0688 |
|---|
| Symbol | |
|---|
| ID | 4251532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 795372 |
|---|
| End bp | 796784 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638117251 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_732825 |
|---|
| Protein GI | 113969032 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.171118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.678776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA CCAAAGCGCC ACTGTTATTG CTTGGTATGA GTTTATGGCT CTCCACCTCC
GCACTGGCAG TTGAAGCAGG AGCGAATGAG ACTGGCCCAG TAAAAGCCCC CTCACGCCCG
AAAAATATTG TGATCATGAT TGGCGACGGC ATGGGGCCTT CCTATACCAG TGCCTATCGT
TATTACAAGG ACAATCCAGA TACCGAAGAA GTCGAACAAA CCGTCTTCGA CCGTTTATTG
GTTGGCATGG CGAGCACTTA TCCCGCCAGC GTCAGTGGTT ATGTCACCGA CTCGGCCGCC
GCCGCGACTG CCCTCGCGAC AGGAGTCAAA TCCTATAACG GCGCCATTTC GGTCGATACA
CAAAAACAGC CACTGCCTAC CATTTTTGAA AAAGCCAAAA CCTTAGGCTT GAGCACGGGT
GTGGCGGTCA CGTCACAAAT CAACCATGCC ACACCAGCGG CCTTTTTATC CCATAACGAG
AGCCGTAAAA ACTACGACGC ACTGGCATTA AGTTATCTCG AAACCAACGC CGATGTGTTT
TTAGGTGGCG GGCAAAAGTA CTTTCCTCCA GAGCTGTTAG CCCAGTTCAC CGCCAAGGGT
TATCAACACA TTACCCGCTT TGACGATCTG GCCAGCATTA CCCAGCCTAA GGTCTTAGGT
TTGTTTGCCG AGGTGCAACT GCCTTGGGCG ATTGATGAAA AAGATGCTAA AAAACTCAGC
ACCTTGACTC AAAAAGCCCT CAGCTTACTG TCGCAAAATG AGCAAGGCTT TGTGCTGCTG
GTCGAAGGTA GCCTTATCGA CTGGGCGGGA CACAACAATG ATATCGCCGC CGCCATGGGC
GAAATGGATG AGTTTGCCAA TGCGATTGAA GTCGTCGAAC AATTCGTACG CCAAAATCCC
GATACCTTAA TGGTTATCAC CGCCGACCAT AATACTGGCG GGTTATCGAT TGGCGCCGAT
GGCAACTACA ACTGGAATCC AGAGATCCTA CGTAATATCT CGGCAAGCTC AGATACCTTA
GCCCAAGCCG CTCTTGGTGG TGACACTTGG CAAGCCGACC TATCCCGCGG GCTAGGCTTT
GAATTGACCG AAGAAGAAGT GACTAAGTTA AATGTTGCCA GAATGCAGGG CTTAGAAACC
ATGGCCGTTG CGATTCGCCA TGTGATTGAT AAACGTACCG ATACGGGTTG GACAACCGGC
GGCCACACGG GGACCGACGT GCAAGTCTTT GCCGCAGGCC CAGCCTCTGA GTTGTTTAAC
GGTCATCAAG ACAACACAGA TATCGCCAAT AAGATTTTTA GCCTGTTACC TAAGCCTAAA
AAGCCAAAAG CCACCGCACA GGTATCGACT CCAGCTCCAG CGCCTGCACC AGCACCAGCA
CCAGAACTAG CACCAGTGCA GTCTCAGGGC TAA
|
|---|
| Protein sequence | MSFTKAPLLL LGMSLWLSTS ALAVEAGANE TGPVKAPSRP KNIVIMIGDG MGPSYTSAYR
YYKDNPDTEE VEQTVFDRLL VGMASTYPAS VSGYVTDSAA AATALATGVK SYNGAISVDT
QKQPLPTIFE KAKTLGLSTG VAVTSQINHA TPAAFLSHNE SRKNYDALAL SYLETNADVF
LGGGQKYFPP ELLAQFTAKG YQHITRFDDL ASITQPKVLG LFAEVQLPWA IDEKDAKKLS
TLTQKALSLL SQNEQGFVLL VEGSLIDWAG HNNDIAAAMG EMDEFANAIE VVEQFVRQNP
DTLMVITADH NTGGLSIGAD GNYNWNPEIL RNISASSDTL AQAALGGDTW QADLSRGLGF
ELTEEEVTKL NVARMQGLET MAVAIRHVID KRTDTGWTTG GHTGTDVQVF AAGPASELFN
GHQDNTDIAN KIFSLLPKPK KPKATAQVST PAPAPAPAPA PELAPVQSQG
|
|---|
| |