| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0681 |
|---|
| Symbol | |
|---|
| ID | 4251892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 788876 |
|---|
| End bp | 789349 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638117244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732818 |
|---|
| Protein GI | 113969025 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.726556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACAC GAAAAATTGA ATTATTAGTG GGTGTGTTTC TCTTAGCGGG CTTAGCCGCC
TTTTTGGTAT TGGTGTTTAA AGTCGCCAAT ATCGAAGTCC AGACCAGCGA CAGCAGTTAT
ACCCTCACAG CCAACTTCAC CAATATCGGT GGCTTGAAGG TACGCTCGCC AGTCAAGGTC
GGCGGGGTCG TGGTTGGTCG CGTGAGTAAG ATTGACTTAG ACCCGGTAAA ACTGGTGGCT
GTGGTCACCA TTGTGATGGA TAAACGTTAC GATAAATTCC CTGAAACCAG TAGCTTAGCT
ATTTTAACTT CAGGTTTACT CGGTGAGCAG TTCCTCGGAT TAACACCGGG CTTTGTCGAT
GATGACGTGA GTATGCTTAA AGATGGTGAC AAGATTGACG ATACTCGCTC CGCATTAGTG
TTAGAAGATC TGATTGGTCA GTTCTTATAT AGTATGGGTT CAAAGGATAA ATAG
|
|---|
| Protein sequence | MLTRKIELLV GVFLLAGLAA FLVLVFKVAN IEVQTSDSSY TLTANFTNIG GLKVRSPVKV
GGVVVGRVSK IDLDPVKLVA VVTIVMDKRY DKFPETSSLA ILTSGLLGEQ FLGLTPGFVD
DDVSMLKDGD KIDDTRSALV LEDLIGQFLY SMGSKDK
|
|---|
| |