Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0680 |
Symbol | |
ID | 4251891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 788036 |
End bp | 788821 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638117243 |
Product | hypothetical protein |
Protein accession | YP_732817 |
Protein GI | 113969024 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.75671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGTTAT TTGACAGTAT TGCCGACCTC GGCCGCAGCG CTATCGAGTT AGTGCTCGGT TTTGGCCGTG CGGGCCTGAT GCTCTGGGGC GCGATTGTTC GCTGGCCTCG GGTACGTAAG GGGTTTCCAT TATTAGTGCG CCAAATCTAT GTGGTCGGCG TACAATCTAT GGTCATTATT GTGGTCTCGG GCCTGTTTAT CGGCATGGTA TTGGCGCTGC AGGGCTACAA CATCTTAGTC GGTTTCGGTA CTGAGGAGAG CTTAGGCCCC ATGGTGGCCT TAAGCTTACT GCGTGAACTC GGTCCTGTGG TCACCGCGCT ATTATTTGCG GGCCGCGCCG GCTCGGCGCT GACCGCTGAA ATCGGTTTGA TGAAGAGTAC CGAACAGTTA TCCAGCTTAG AGATGATGGC GATTGACCCG CTGCGGCAAA TCATTGCGCC CCGTTTTTGG GCTGGGGTGA TCAGCATGCC GCTGTTGGCG CTGATGTTTA CCGCGGTAGG CATTTATGGC GGCCATTTAG TGGGCGTGGA ATGGAAAGGT ATCGATGGCG GGGCTTTTTG GTCGATTCTG CAAGCTTCGG TCGAATGGCG CCAAGACATA GTGAACTGCC TGATTAAGAG TGGCGTATTT GCCGTGGTGG TGACTTGGAT TGCCTTATAC CGTGGCTATC AAGTGGTGCC GAATCCTGAG GGGATCAGCC GTGCAACCAC CTCAACCGTG GTGCAATCGA GCCTCGCCGT ACTGGCATTG GACTTTTTAC TAACAGCCCT GATGTTTGGC CGCTAA
|
Protein sequence | MKLFDSIADL GRSAIELVLG FGRAGLMLWG AIVRWPRVRK GFPLLVRQIY VVGVQSMVII VVSGLFIGMV LALQGYNILV GFGTEESLGP MVALSLLREL GPVVTALLFA GRAGSALTAE IGLMKSTEQL SSLEMMAIDP LRQIIAPRFW AGVISMPLLA LMFTAVGIYG GHLVGVEWKG IDGGAFWSIL QASVEWRQDI VNCLIKSGVF AVVVTWIALY RGYQVVPNPE GISRATTSTV VQSSLAVLAL DFLLTALMFG R
|
| |