| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0678 |
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| Symbol | |
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| ID | 4251889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 785683 |
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| End bp | 786660 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117241 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_732815 |
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| Protein GI | 113969022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.732488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGACC AATCACAATT GCGCCAGTGG GGCTGTAAAG TCATCGATAT TGAAAAATCG
GCCCTCGACA ATCTTTATCA ATATGTCGAT TCCGTTGAAT TCGCCCAAGC CTGCGAACTT
ATTCTCAACT GTACCGGCAA AGTGATAGTG ATGGGGATGG GAAAATCAGG CCATATTGGC
AATAAAATCT CGGCCACCCT AGCCAGCACA GGTACCCCAG CTTTTTTTGT CCATCCAGGT
GAAGCCAGCC ATGGTGACCT AGGCGTGCTC TCGGACAATG ATGTGATTCT TGCGATTTCC
AACTCGGGCG AGTCGAGCGA AATCCTCGCG CTGATGCCCG TTATCCAACG TAAAGCCATC
CCAGTGATTG CCATGACAGG CAAGCCAGAA TCCACCATGG CGCGTCTATC TAAAATTCAT
TTATGTATTG AAGTACCAGA GGAAGCCTGC CCGCTTGGGC TTGCGCCAAC CTCAAGTACC
ACAGCAACCT TAGTCATGGG CGATGCCATC GCCATTGCCC TCCTGCAAGC CAAAGGTTTT
ACCCGAGAAG ATTTCGCCAT GTCCCATCCG GGCGGCGCCT TAGGTCGTAA GCTGCTGCTT
AAGGTCAGCA ACGTGATGCA CAGCGGTGAT GACTTACCTC TGGTTAAACA CGATATCTGC
ATCACCGATG CCCTGTATGA GATCTCCAAG AAAGGCCTTG GCATGACCGC AGTTATCGAT
GAGCAAAACA AACTCGTGGG TATCTTTACC GACGGTGACC TGCGCCGCGT TATCGATGCC
CAAGTCAACC TACGCACCAC GCCGATTGCC GATGTGATGA CGCGAAACTG TGTCACAATT
ACTGAAAACG TTTTAGCGGC ACAGGCGCTG CAAGTGATGG ATTCCAAAAA TATCAACGGC
CTGATAGTGA TAGATAAAGA CAATCATCCT GTCGGTGCGC TCAATATGCT CGATATGGTT
AAAGCGGGAG TGATTTAA
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| Protein sequence | MVDQSQLRQW GCKVIDIEKS ALDNLYQYVD SVEFAQACEL ILNCTGKVIV MGMGKSGHIG
NKISATLAST GTPAFFVHPG EASHGDLGVL SDNDVILAIS NSGESSEILA LMPVIQRKAI
PVIAMTGKPE STMARLSKIH LCIEVPEEAC PLGLAPTSST TATLVMGDAI AIALLQAKGF
TREDFAMSHP GGALGRKLLL KVSNVMHSGD DLPLVKHDIC ITDALYEISK KGLGMTAVID
EQNKLVGIFT DGDLRRVIDA QVNLRTTPIA DVMTRNCVTI TENVLAAQAL QVMDSKNING
LIVIDKDNHP VGALNMLDMV KAGVI
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