Gene Shewmr4_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0676 
Symbol 
ID4251887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp784575 
End bp785135 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID638117239 
Producthypothetical protein 
Protein accessionYP_732813 
Protein GI113969020 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0807822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG TGACCCTCGC CATTATCGCC TTTTTTGGCA CTGCACTGGT GCTATATTGG 
CAAGTGCAGC AAAAACGCGG TGGCGATACG GATGACAGCT TGAATGTCAG TGACAGACCC
GATTACATTA TCGAAGATCT GCGCAGCATT GAATTTAATG AGCAAGGGCA AGTTAACAGT
CGCGTCACGG CAAAGCACAT GGAACACTAT GAGCTGAAAA ACCAAACCGA CTTTACTGCT
CCCGTCTATC TTGTCTATCC CGACCAAGGT AAAGCAAAAT GGCAGATCCG AGCCGACCAA
GGTCGACTCA ACAAAGATAC CGGCAAGGTT GTATTAGAAA ATAATGTTAT TATCGATGCC
ATCAGCCCTG GTGAACCCAT ACAGACATTG TCCACCAGTT TTTTAGAACT CGATCTCAAC
ACTATGATAA TGACCTCTGA CCGCATCATT TACGTCACAG GGAAAGATTT TAATATTCAA
GGGCAAGGCC TTTATGCCGA CCTTAACGCG CAGGAAGTGA AATTGACCAG TCAGGTAGTA
GGAACCTATG AAGCAAAATA A
 
Protein sequence
MSRVTLAIIA FFGTALVLYW QVQQKRGGDT DDSLNVSDRP DYIIEDLRSI EFNEQGQVNS 
RVTAKHMEHY ELKNQTDFTA PVYLVYPDQG KAKWQIRADQ GRLNKDTGKV VLENNVIIDA
ISPGEPIQTL STSFLELDLN TMIMTSDRII YVTGKDFNIQ GQGLYADLNA QEVKLTSQVV
GTYEAK