Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0676 |
Symbol | |
ID | 4251887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 784575 |
End bp | 785135 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638117239 |
Product | hypothetical protein |
Protein accession | YP_732813 |
Protein GI | 113969020 |
COG category | [S] Function unknown |
COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0807822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTG TGACCCTCGC CATTATCGCC TTTTTTGGCA CTGCACTGGT GCTATATTGG CAAGTGCAGC AAAAACGCGG TGGCGATACG GATGACAGCT TGAATGTCAG TGACAGACCC GATTACATTA TCGAAGATCT GCGCAGCATT GAATTTAATG AGCAAGGGCA AGTTAACAGT CGCGTCACGG CAAAGCACAT GGAACACTAT GAGCTGAAAA ACCAAACCGA CTTTACTGCT CCCGTCTATC TTGTCTATCC CGACCAAGGT AAAGCAAAAT GGCAGATCCG AGCCGACCAA GGTCGACTCA ACAAAGATAC CGGCAAGGTT GTATTAGAAA ATAATGTTAT TATCGATGCC ATCAGCCCTG GTGAACCCAT ACAGACATTG TCCACCAGTT TTTTAGAACT CGATCTCAAC ACTATGATAA TGACCTCTGA CCGCATCATT TACGTCACAG GGAAAGATTT TAATATTCAA GGGCAAGGCC TTTATGCCGA CCTTAACGCG CAGGAAGTGA AATTGACCAG TCAGGTAGTA GGAACCTATG AAGCAAAATA A
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Protein sequence | MSRVTLAIIA FFGTALVLYW QVQQKRGGDT DDSLNVSDRP DYIIEDLRSI EFNEQGQVNS RVTAKHMEHY ELKNQTDFTA PVYLVYPDQG KAKWQIRADQ GRLNKDTGKV VLENNVIIDA ISPGEPIQTL STSFLELDLN TMIMTSDRII YVTGKDFNIQ GQGLYADLNA QEVKLTSQVV GTYEAK
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