Gene Shewmr4_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0670 
Symbol 
ID4251881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp780114 
End bp780968 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content50% 
IMG OID638117233 
Producthypothetical protein 
Protein accessionYP_732807 
Protein GI113969014 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0400157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG TCATAGTGTC AGGGCGCTCA GGCTCAGGCA AATCGGTCGC ACTTAGAGTG 
CTTGAAGATC TCGGCTATTA TTGTGTCGAT AATCTCCCCT TGCCGTTGAT TGGCAGCTTA
CTCGAACAGC TCAAGGGCAG TAACGATCTC GTCGCCATCA GCGTCGACGT GCGTAATCTG
CCGGAGCAAG ACAAGGTACT CGTCAAACAG CTCACAAGCC TGCCCGAGGG CACTGAACTC
ACCAGCTTCT TCTTAAATTC CAGCGATAAA GTACTGCTAA AGCGCTACAG CGAGACTCGG
CGCTTACATC CCTTATCTAA GAGCCGAGTA TCACTGCAAG AAGCCATCAA ACTTGAAGGC
AAATTGCTCG AGCCCCTGTC ACAACAGATG GATCACTACA TAGATACCTC GAATCTGAAT
ATCTATGAAC TCAGCGACCA AGTGCGGCAA ATCCTGCTTG GCAGTGTCGA TAAGGAACTG
GTGATCAACT TCGAGTCCTT CGGTTTTAAG CATGGTATGC CAACCGAAGC CGACTTTATG
TTTGATGTGC GCTTTTTACC CAATCCCCAT TGGGAACCCG AGCTGCGCCC TCTCACCGGC
TTAGATGAAC CCGTTGCCGA GTTTTTAAAT CGCCAGCCGC TTGTCAATAA GTTCATCTGG
CAAATTGAGA ATTTACTCGA GACTTGGTTG CCTCACTTAG AGCGTAATAA CCGCAGCTAT
CTGACCATCG CCATCGGCTG TACCGGCGGT CAACACAGAT CAGTTTACGT GGCCGAGCAA
CTGGCTAAAC GCTTTAGCAA CGGTAAACAC AAAGTGAATG CCCGCCACCG AGAGTTAAGC
CATGCCAAAG CTTGA
 
Protein sequence
MKLVIVSGRS GSGKSVALRV LEDLGYYCVD NLPLPLIGSL LEQLKGSNDL VAISVDVRNL 
PEQDKVLVKQ LTSLPEGTEL TSFFLNSSDK VLLKRYSETR RLHPLSKSRV SLQEAIKLEG
KLLEPLSQQM DHYIDTSNLN IYELSDQVRQ ILLGSVDKEL VINFESFGFK HGMPTEADFM
FDVRFLPNPH WEPELRPLTG LDEPVAEFLN RQPLVNKFIW QIENLLETWL PHLERNNRSY
LTIAIGCTGG QHRSVYVAEQ LAKRFSNGKH KVNARHRELS HAKA