Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0658 |
Symbol | |
ID | 4251589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 765787 |
End bp | 767583 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117221 |
Product | nitrate/nitrite sensor protein NarQ |
Protein accession | YP_732795 |
Protein GI | 113969002 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00020013 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.301061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG GCAGCCTTAC CTCCAAAATA CTGGGTTTAA TGTTAGTACT GATTTTGCTT TCTAGCAGCC TAGCCATCTT CGCAATCATC AATTTGTCTT ACAGCTTAGG CGATGCAAAG GCCATCAATG CCTCGGGTTC ACTGCGGATG CAAAGCTATC GCCTGATGTT TTATGCCAAT TCAGGCAGTG AAGCCGCCCA AGAAAAAATT GCCGAGTTTG AAAACACTCT GCATTCCGAG GCGCTGCAAC CATCAAACAG CTGGTTCAGC CCGAAAAAAA TCGCCGAACA GTATCAGCTC GTTATCGATA AATGGCTGGT CATGAAGTAC TACATTGAGC AGGAAAACTC CCGCGACTAC GCCGCCTCGC TCAAGGACTT TGTCGATACT ATCGATTTAT TAGTGCTCGA AATGGAGCAC CATGCCGCCT TCAAGTTGCG CCTCCTTGCC GCGAGCCAGA TTTTTGGGCT TGGGCTGATG CTCGTTATCG CTTTTCTCGC GGTACGTTTT ACCAAGCGCA AAGTCGTAGT GCCCTTGCAG CAGTTAATGG AATCGGCCAA TACCATTTCC AAGGGCAACT TCGAGATAGA AATGCCCGAG ACTGAATATA TCGAGCTCAC CGCCCTAACC CATGCGCTGC AAAAAACCGC ACGCGAGCTG GCAACCCTGT ATAGCAACTT AGAATCCCAA GTCGCCGAAA AGACCCTAGC ACTCACTAGG GCAAACAATG AGCTAGCATT TTTATACGAT AACCTATTGA CACTTAATGC CAAAAAGCTG GACTACAAGG CGCTCAAGGC GGCGTTGAAT CAATTGAAGG ACTATGAGTC TATCGACCAT TTAAGACTGA TCATTCAGTA CCCAGAGCAA GAGCTAGAAG TGGTTGAAGC TGATGGCGGC TGGCCGGAAA CGACTCCCCT TTGCACCCGC TTTCCATTGC AATTTGAGCA GGCCGACTTA GGTTACTTAG AACTGATTTC GGCGCAGGAT ACCAATACGC CGCTGTTTAA AAACTTTGCC ATCATGCTCA CCCGCTCCAT CGTTATCCAT AACGCCACCG AGCAGCGTCA ACAACTGGCC TTGATGGAAG AACGTGGGGT TATCGCCAGA GAGTTACACG ACTCCCTCGG CCAAGTTCTG TCTTTCCTCA AAATTCAAAT TAGTTTGCTA CGCAAAAACT TGGATCATAG CTGTCGCAGT CCTGCGGTGG AGAATCAACT GACGGAGATA AACGAAGGGG TGAGTACAGC CTATGTACAG CTCAGGGAGT TATTATCCAC CTTCAGATTA ACCATTAAGG AACCGAATCT GAAGAACGCG ATGGAAGCCA TGCTAGAGCA GCTTAGGGCC AATACCGATA TCAAGATCCA CCTCGATTAC AAACTTTCGC CCCAATGGCT CGAGGCCAAG CAGCATATCC ACATTCTGCA GATCACCCGT GAGGCCACAC TCAATGCCAT CAAGCATGCG AATGCCAGTC GGGTCATCAT TCGCTGTTAT AAAGATGACA ATGGTATGGT CAATATCAGC GTCAGTGATA ACGGCATAGG GATTGGTTAT CTTAAAGAAC GAGATCAACA CTTTGGCATA GGGATAATGC ACGAACGCGC AAGTAAATTA GGCGGAACTG TTGTATTTAG TAGCAATGAT ACGCACACTA ATAGCAAGGG AATTGCCGAA CAACTAGACC AAGAAAACTC GGAGATGTCC TTAACACCTA ATAACAAATC CAATTTGTCT CAGGGAACCA AAGTTACATT AGTTTTCCCT TCTCAACAGG AGCCTACACA TGGGTAA
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Protein sequence | MKRGSLTSKI LGLMLVLILL SSSLAIFAII NLSYSLGDAK AINASGSLRM QSYRLMFYAN SGSEAAQEKI AEFENTLHSE ALQPSNSWFS PKKIAEQYQL VIDKWLVMKY YIEQENSRDY AASLKDFVDT IDLLVLEMEH HAAFKLRLLA ASQIFGLGLM LVIAFLAVRF TKRKVVVPLQ QLMESANTIS KGNFEIEMPE TEYIELTALT HALQKTAREL ATLYSNLESQ VAEKTLALTR ANNELAFLYD NLLTLNAKKL DYKALKAALN QLKDYESIDH LRLIIQYPEQ ELEVVEADGG WPETTPLCTR FPLQFEQADL GYLELISAQD TNTPLFKNFA IMLTRSIVIH NATEQRQQLA LMEERGVIAR ELHDSLGQVL SFLKIQISLL RKNLDHSCRS PAVENQLTEI NEGVSTAYVQ LRELLSTFRL TIKEPNLKNA MEAMLEQLRA NTDIKIHLDY KLSPQWLEAK QHIHILQITR EATLNAIKHA NASRVIIRCY KDDNGMVNIS VSDNGIGIGY LKERDQHFGI GIMHERASKL GGTVVFSSND THTNSKGIAE QLDQENSEMS LTPNNKSNLS QGTKVTLVFP SQQEPTHG
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