Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0641 |
Symbol | |
ID | 4251659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 746233 |
End bp | 747141 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117204 |
Product | hypothetical protein |
Protein accession | YP_732778 |
Protein GI | 113968985 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000281394 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTCGCC TAGGTAAGCA GCAGTTGCAA CTCTTGGAGG GCGTTTACCT TAATCGCTCT CCAAGGGTGA AACTCAGCCC GAATTGGCGG ACGATTTACC GCGAGTTAGA AGTGGGCGAG CTGGATGGCG CGGAAAAATA TTTGTGCTTT GCGCCGCGGG ATTTTGAGTT GCTGCGCCAG GGCGTGTTAG CAAAAGAGGG CGTCGATTTA CAGGCTCTGG ACTTTAATCT AGACCGTATC GCCATGTCCG CCCAAAGCCA AAATGAAAAG CTGGCGAGTA TCCGCCCAGA AGCCGAGTAT GTTTTGTTGA AGTATCTCGG TTTTGAATCG CCTCCTATGG GAATGTCTAC GCGTTCTTCG TTACGCACTC CCTTAGATGA AGCAGAGCAG CTTTGCCATG ATCTTTATGT TAAAGCCATC TTAGTGATTG AAAACCTAGA TATATTCGAT GCAATAACTC AAGCGCGCTT ACCGGCCGAA CTTAGCCGCA TTATGGTGAT TTACCGTGGT AGTGGCCACC ATTCCCCCAT TGGTGTGCGG CATTTTTTGC AGGCAATGGC GGGTAAAATG CCGATCATTG CCTTTACCGA TCTCGATCCC GCAGGGCTGC AAATTGCCCA TACCTTAACG GGCATGACCC ATTGTATCGT GCCGCAGTTA GCGCTTGTCG CGCCCAGCGA GTTACTCGCT ATCCCACAGA TTAATTCCGC TGATGACTTT GCCAAGCAAG CGCCTCAGGC CAAATATTTA CAGTCAACCG ACTTAAAAAA TTGGCAGCAA TTGAGTCTTT GGTTAAATCA GCAACGCATT AGCATTAAAC AGCAGCACCT GCTAGTGCAT CGGCTTGAGC TAGTGCTACT GGCATATGAT GAGTCGTTAT CCATCCCCAT CTATCTACAA ATACCTTAA
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Protein sequence | MARLGKQQLQ LLEGVYLNRS PRVKLSPNWR TIYRELEVGE LDGAEKYLCF APRDFELLRQ GVLAKEGVDL QALDFNLDRI AMSAQSQNEK LASIRPEAEY VLLKYLGFES PPMGMSTRSS LRTPLDEAEQ LCHDLYVKAI LVIENLDIFD AITQARLPAE LSRIMVIYRG SGHHSPIGVR HFLQAMAGKM PIIAFTDLDP AGLQIAHTLT GMTHCIVPQL ALVAPSELLA IPQINSADDF AKQAPQAKYL QSTDLKNWQQ LSLWLNQQRI SIKQQHLLVH RLELVLLAYD ESLSIPIYLQ IP
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