Gene Shewmr4_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0639 
Symbol 
ID4251657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp744317 
End bp744982 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID638117202 
Producthypothetical protein 
Protein accessionYP_732776 
Protein GI113968983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000836292 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCTG CCATGAATGA GTCAAACCAA ACCGTATTAG TCGGCACGGG CGCCATTATC 
GAACTCTTGC TAAAAGGTGA GTTTATTTGC CGCACCACCA ATGAAGATGG CTGGCGCGCA
TTGAAAAATA ACAGCACCCG CGAGCGGGTC GAGGCTTATC TGAATCAAAT CAATCGCACC
GTGGCTTCGG CCGCCGAGGG CGATGTGTTT TTCTGCGGTT ATTTGCAGTT AGGCGAGAGC
GAACGCAAGG TGATTTCATC GCAGTTTAAG GATATTTGTC AGGCACTTAT TCCTATGGTG
GAGTGGCTGG TATTAGTGCA GGAAGCCAGC GGCCAAGATG CGCCCTTAAG CGAAGGCGCG
CCAGTGCGCT TAACCGAGTT GCAAAGCCGA ATTGAAGATA CGCCCGCGTT TCGTGAGCAG
TTGGCCAAAC TCAGCCAATA CCGTTTATTC GGTTCAACCA GTACCAATAG CGATGCGCAA
ATTAAGCTAG TGTTCAAGCG CTTAGTAGAG CTTGGTTATC TGGTGCGCCC TAACGTGGAA
AAACAAATTT ATATCGCCAC TGGCAAGCTG GATTACCTGT ATGAAGTGAT CCGCTTTATC
GACGAGACCG AAGGCCTAAG CCTAGAAGCG CAGGCGGAAA CGGCGACGCA GCGGGATTTA
CTATGA
 
Protein sequence
MSAAMNESNQ TVLVGTGAII ELLLKGEFIC RTTNEDGWRA LKNNSTRERV EAYLNQINRT 
VASAAEGDVF FCGYLQLGES ERKVISSQFK DICQALIPMV EWLVLVQEAS GQDAPLSEGA
PVRLTELQSR IEDTPAFREQ LAKLSQYRLF GSTSTNSDAQ IKLVFKRLVE LGYLVRPNVE
KQIYIATGKL DYLYEVIRFI DETEGLSLEA QAETATQRDL L