| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0638 |
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| Symbol | |
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| ID | 4251656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 740646 |
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| End bp | 744317 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117201 |
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| Product | hypothetical protein |
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| Protein accession | YP_732775 |
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| Protein GI | 113968982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000321455 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAGCT TGATTCGTAT TGTGCTGATT GATACGCACC TTCCGGGCGT TGTGGAACTC
GCCCTCAATG GCCATACCAA TATTTGTGGT ACTAACGCCT CGGGCAAAAC CACTCTGCAA
CGCTTAGTGC CGGTATTTTA TGGCGAATAT CCTAGCCGCG TGGTGCCTTC AACCCGTGAC
AGTTTCGAGC GTTGGTACTT GCCACACGAT TCAAGCTACA TCATTTACGA ATACCAAAAG
GCCGATGGCT TGCTCTATCA AGCTGTGCTG GCGTCGGCGG GCGATGGCAA AGGGGTGAAT
TACCGCTTTA TCGCTAAAGG TTTTGAGTTA AGCGATTATA TTAAATCGCA AAATGGTGAC
ACTATTCTTT GCCACACCAT GGCGGAACTG GGCCGCGATT TAAAACGCCA AGGTATTGCC
ACCACTAACT TGCTTAACAC CCGCGAATAC CGCGCGATTA TTCAAAACGA TCGCACTTTG
TTAAGTACGG GCAGCAACCG CAGTGAACTG CGAGCCTATG CGCACCAATT CGCCCTGTGT
GAAGGTGAGC ATTCACTGCG CCATATCGAA AAACTCGCCA AGGCGGTGCA CTCGAAAGAA
GGCAAAATGG AAACGGTCAA ATCCATGATC GCCGCCATTT TGGAAGAAGA CGGGGTGAAT
CCACCTAGCT CACGCCTCAA TCCGCAACGT GTCGAGGCGT GGATCCGCGA GAGTCAGCTT
ATCCAAGGCT TTGAAGTGAT CCGCCCCGAG TTTGAAAAGC TCGAGCAGGA ATTTAACCAA
TTACTCAGCG CCGAGATGCG TCTCTCGAGC CTGTCCCGTG GTTATCGCAA CGACGAAAGC
CTAGAAGCCG ATCGTTTAGA GATCCAACAA ACCCTGTCTA AGGAGCTGAA TCTAAAGCTT
CGAATGTTGG ACGACGAATG GAAAGAAGTG CGTGACGAGC TAAACCTCGA CCTATCCGCC
GCCAAGGGCG ACGTGGCCAA GTGCGAGTAC GAACTCGATG CGATTGAAGA TCAGCACGGC
GCCTTTTTAG ATGCCAATAT CGAGCAAGCT AAGGCCGACT TGGACATGCT GCCAAACTGG
CGCGCTGATA TGGAAAACTT AAGCGAGCGC CATAAATTAC AAACCGAAAA GCACCAAGAT
ATTGAAGCGG CTTACAATGC CCGCCGCAGT AAAATTGGCG AGCAGTTAAA CCGCGAGCTT
GAAGGCTTAC ACGCGGATCA AGACAAGCAA CGCGAAGCGC GCGATAAGCA GCGTGAAGTG
GCAAGAGCCG ATCTCGATGC CCTCGAAGCC CAATGGCGCA GCCAAATGGA TGCGGGCAAG
GCAAGCTTTA GCGAGCAGGA ATATCAATTC AAACTCAATG CCGCCGAGCT TAAATTACGT
GTCGATGGTG TGACCTACAC CGAGGAAGAA AAGTTAAGCC TAGCGATTTT TGACGAGCGG
ATTCACCGCG CCGACGAAGA GCAAGAAAGC TGTAACGCTA AGGTGGAACG TTTAAGTAGC
GATGAGCGTA AGCTGCGCGC CAAACGCGAC CAAGCCAACG AAGCGCTGCG TATCGCCAGC
CTGCGGGTTA ACGAACGCCA AACCGCGCTC GATGAACTGC ACCATATGCT GTTCCCGCAG
TCCCATACCT TGCTCGAGTT TCTGCGCAAG GAAGCCCAAG GTTGGGAGCA GAGTCTGGGT
AAAGTGATTG CCCCCGAGTT GCTACATCGC ACCGATTTAC ATCCGAGCGT GACCGGAACG
AGCGACACCC TGTTTGGGGT GCATTTGGAT CTTAAAGCCA TCGATGTGCC TGAATATGCC
GCCTCCGAGC AGGAACTGCG TATTCGTTTA AGCAAGGCCG AAGAGGCGCT GCAAAGCGCG
CAGGAATTAC AGGCCGAGGC CGAATCACAG CTGGTGGCGA TTAACGGTGA GCTGGATAAA
CTCAGCCGTG AACTCACCTT TGCCCGCACG GCTTACAAAA ATAGCCGCGA TGATTTACGT
CGTCTGTTCG ATGAAAAACG CAGTGAGCAG GACAAGATCA ACAAGGCGCT GGCCGAGCGT
AAAGCCTTTG CCCAGCAGCG CTTAACTCAA CTCGATGGCG AGCTAAAGCA GCTTAAGCAT
CAACATCAGC TCTGGCTCGA AGAGCAAAAA GAGCAGGCGC TCGAAGCGCG GATGGAAAAA
CAAGCCTACT GGCAGGAAGT GATTGGTGCG CTCGACAATC AACTCGGGCA AATCAAGGCG
ACTATTGATG CTCGCCGCGA AAGCGCTAAG GCTGAGCAGA AAGCCTGCGA AACCTGGTAC
AAAAACGAGC TTAAGTCCCG CGGTGTGGAT GAGGACAATA TCCTTAAACT CAAGCAACAA
ATCCGTGAGC TTGAAACCAA AATCAGCCGC GCCGAGCAGC GCCGCAGTGA AGTATTGCGC
TTCGACGATT GGTATCAACA TACTTGGTTG CTGCGTAAGC CTAAGTTGCA GACCCAATTG
AGCGACGTAA AACGTGCCGC CTCGGAAATC GATCAGCAGC TTAAAGCCAA GACTCAAGAA
GTGAAGACTC GCCGCCAACA ACTCGAGACC GACCGTAAGG CCTCGGATGC GGCGCAAATT
GAAGCTTCTG AAAACTTAAC CAAACTGCGC GCCGTGATGC GTAAGTTGGC CGAGTTGAAA
CTGCCCGCCA ACAATGAAGA AGCCCAGGGT AGCCTAGGTG AGCGTTTGCG TCAGGGTGAA
GATTTACTGC TAAAACGCGA TTATTTGATG GGCTCGGTTA AGCAATATGT GGAGCATTTT
GACTCTGTAA TTGCCAGCAA GTCAGGCTCA GGTTTAGCCG AGACTTGGGA GCGCGCTCGC
GAAGAATCGA GCTTTATCAA TGACAAAGGT ATTCGCCTGC TGGATTACCG CAAGCTAGTG
CCACAGCTTG AACAGTTACT CAATGTGATT GTGCCGCAAT CGATTATGGC GCTGCGTGAA
CAGGGGCGGA TCTTCGGGGT CGACTTAACT GCCTTCTACG ATGTACTTGC CGATATCGAC
CGTCGCATCG CCTCCCAGAG TGCGCGCATT ACCCGCGAAG TGGGCGAGGA GTTATTCCTC
GATGGCGTAT CCGAGTCAGC GGTTCGTATT CGCTCTAAGA TCAGTGAATT AGAGTTTTGG
CCTGAGCTTG AGCAGTTCGT TAAAGCCTTC AAACAGTGGA AGGCCGACGG CTTTAATGGT
CTGCCCGATG AGGAATACAC CAACAGTATG CGCCGCGCCT TGGATATTAT TGGCCGCGCG
GCCTTAACTG GCGGCATTTC TAAGTTGCTT GAAATCGAGC TGCGCCTCAA AGAGGGCAAT
AGCGACCTGA TTATCCGCAC CGACAGACAG CTGAACGAAT CCTCGAGCCA CGGTATGGCT
TATTTGATCC TGTGTAAGTT CCTGTTGGCA TTCACGCGCT TGTTACGTGG CCGTGCCGAC
GTCACCATTC ACTGGCCGAT CGACGAGCTG GGCACGCTGC ACCACACCAA CGTGAAGAAG
ATTTTCGATG CCTGTGGTAA CAACAATATC AGCGTGTTAG GCGCCTTCCC GAACCCAGAG
TCAGAAGTGC TGAACCTGTT CGAGAACCGT TACATTATTA ATAAACAAAC CAAGAAGTTG
CAGGTGGTGA AGCCCAAAGC CAATCCGATT GCCGATATGT TGAGTAAACG CCTGAGCAAG
GAGGCCATCT AA
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| Protein sequence | MPSLIRIVLI DTHLPGVVEL ALNGHTNICG TNASGKTTLQ RLVPVFYGEY PSRVVPSTRD
SFERWYLPHD SSYIIYEYQK ADGLLYQAVL ASAGDGKGVN YRFIAKGFEL SDYIKSQNGD
TILCHTMAEL GRDLKRQGIA TTNLLNTREY RAIIQNDRTL LSTGSNRSEL RAYAHQFALC
EGEHSLRHIE KLAKAVHSKE GKMETVKSMI AAILEEDGVN PPSSRLNPQR VEAWIRESQL
IQGFEVIRPE FEKLEQEFNQ LLSAEMRLSS LSRGYRNDES LEADRLEIQQ TLSKELNLKL
RMLDDEWKEV RDELNLDLSA AKGDVAKCEY ELDAIEDQHG AFLDANIEQA KADLDMLPNW
RADMENLSER HKLQTEKHQD IEAAYNARRS KIGEQLNREL EGLHADQDKQ REARDKQREV
ARADLDALEA QWRSQMDAGK ASFSEQEYQF KLNAAELKLR VDGVTYTEEE KLSLAIFDER
IHRADEEQES CNAKVERLSS DERKLRAKRD QANEALRIAS LRVNERQTAL DELHHMLFPQ
SHTLLEFLRK EAQGWEQSLG KVIAPELLHR TDLHPSVTGT SDTLFGVHLD LKAIDVPEYA
ASEQELRIRL SKAEEALQSA QELQAEAESQ LVAINGELDK LSRELTFART AYKNSRDDLR
RLFDEKRSEQ DKINKALAER KAFAQQRLTQ LDGELKQLKH QHQLWLEEQK EQALEARMEK
QAYWQEVIGA LDNQLGQIKA TIDARRESAK AEQKACETWY KNELKSRGVD EDNILKLKQQ
IRELETKISR AEQRRSEVLR FDDWYQHTWL LRKPKLQTQL SDVKRAASEI DQQLKAKTQE
VKTRRQQLET DRKASDAAQI EASENLTKLR AVMRKLAELK LPANNEEAQG SLGERLRQGE
DLLLKRDYLM GSVKQYVEHF DSVIASKSGS GLAETWERAR EESSFINDKG IRLLDYRKLV
PQLEQLLNVI VPQSIMALRE QGRIFGVDLT AFYDVLADID RRIASQSARI TREVGEELFL
DGVSESAVRI RSKISELEFW PELEQFVKAF KQWKADGFNG LPDEEYTNSM RRALDIIGRA
ALTGGISKLL EIELRLKEGN SDLIIRTDRQ LNESSSHGMA YLILCKFLLA FTRLLRGRAD
VTIHWPIDEL GTLHHTNVKK IFDACGNNNI SVLGAFPNPE SEVLNLFENR YIINKQTKKL
QVVKPKANPI ADMLSKRLSK EAI
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