| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0636 |
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| Symbol | |
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| ID | 4251654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 737763 |
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| End bp | 739811 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117199 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_732773 |
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| Protein GI | 113968980 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000492691 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCACAG TGTTGAGTGT TGTCGTATCA ACTGTCGTAT CAAGCGTCGT ATCCGTATCA
AACAATGGCA ATGGCTGGAG CTGGGGCAGG CTATCGGGAG TGAGGCTCAT CATCGCCTTA
TTTGGCCTGT TGAGTTTGAG TGTGGTGGCC GAAGAATCGG CAGCTCAAAT GGCGCAGACT
GGTGTATTAA GCTTAGCGCC TGCCGCGCAG CAGATGGATG ATGCCGCGAA CTATCAAGTG
GTCGATGTGG GCGTATTGGC GATTCGAGGC TACAAGGGCA CCATCAATCG TTGGCAACCG
CTGATGGGGT GGCTTGAGTC ACAAATTCCC AATAGTTACT TTAGGTTGCA TCCATTAAGC
CTCGAAGAAT TAGCCAGAGG GGTTGAAACC GAGGCTCTCG ATTTTGTCAT CACTAATCCT
GGGCAATCTG TGATGCTGGC GCGGCAGTAT TCACTCTCTT GGCTCGCCAC CCTACGAAGC
CCTATCAATA ATGGTGCGGC CATGCAGGTG GGGTCGGCGC TGGTGGTGAG GGCCGATTCA
CCCTATAAAA CTTTATCCGA TCTCAAAGGC AAGCGCCTTG GCATAGTCTC CAAAAATGCC
TTCGGTGGTT ATCTCACTAT GGTCTACGAG GCGCAGCTAA AGGGCATAGA TTTAATCCAT
TTAGTGGGGG ATATCATTCC CTTAGGCTTT CCGCTCGATA ACTTGGTTTA TCAGCTTGGC
GGTTCAGGTC AGCAGGGTGG GACAAGTGAG CTTAGTGGTA CAGATGAACC AAGCGTTAAA
ACATCAAGCG GTAAGGCTCC AAGCGTTAAA GCTCTAGGCT TAGATGCGGC GATTGTGCCT
GTCTGCCAAC TTGAGCAAAT GCAGGCCGAA GGCTTGATTA ACATAAAGGA TTATCGGGTG
CTCGATAATC AGGCGCCCGT TGGGTTTCAT TGCCAAGTGT CGAGTCGGCT CTATCCCAAC
TGGTCGATGG CTAAGACCAA TCGTGCGATA CAAACCTTAG CCAAGCAGGT GACTCAAGCC
CTACTGGCCT TACCCGAAGA CAGCCCCGCC GCGAGAGCCG CCGAATCCGC GGGTTGGACT
ACGGCCGTGA GCCAACTTGC GATTGATCAA CTGCTTAAAG ATCTCGATAT GCATCCCCTG
CAAACCCCGT GGTGGCAGCG AGCGTGGCAA TGGGTGAAGC TGCATCAGCA TTGGGCTTGG
CTAGCGTTGG CGATTTTAGT ACTGCTCAAC GTGTACCATT TCTGGCTCGA ATATCGCTTT
AGCCGCCGTG GCCGTGAGTT GATAAACACC CAGCGACAAC TCAGTGAAAA CCGTGCCCTG
TTGGAACATG CCCAGCGCAT CGCGATTGCG GGGGAGTTAG GGGCGAGTCT ATCCCATGAA
CTCAATCAAC CGCTGGCGGC GATTGGCCAT TATTGCCATG GCGCCGAGGT GCGTTTGCAG
CGTGGAACCC GTCCTGAAGA GTTACAGGCT GTGCTGAACT TAATTCAGCA AGAGGTCAGC
CGCGCCGACA GTATTATCAG CCGTTTGCGT AACTTATTGA AAAAGCGGCC AGTCTCCAAA
CAACCTTTAT ATTTGCACCA ACTTGTGAAC GACACTGCGC CGCTGCTCGC CTATGAGCTG
GAGCAGCATC AGATCCAGCT TTCCACCAAT ATCAGTGGCG AAGCCTATCA ATTGCCCTTG
GATGAAGTCG GCATGCAGCA GCTACTGCTC AACCTATTGA AAAATGCCGC CGATGCCTGT
GTGCAGCGTC AGCAGGCTGA GCTTGACCCG GCAAAACCCT ATCTGCCCAC AATCGATATC
GATCTTAGGT ATCTTGAGCG TAAGTTACTG CTCACTGTGA CAGACAATGG CACTGGGCTG
ACCGAGGATG CCAATCTGCT GATGCAAGCC TTTTATTCAA CTAAGTCCGA GGGCTTAGGG
CTAGGGCTGG TGATTTGCCG TGATATCGCC GAGAGTCATG GTGGCCGCTT TAGCCTAGAA
ACCGCTTTAA GTGGCGGCTG CCAAGCGCAG GTATCCTTAC CCCGTAAGCT AGATGGAGCA
CCAGTATGA
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| Protein sequence | MGTVLSVVVS TVVSSVVSVS NNGNGWSWGR LSGVRLIIAL FGLLSLSVVA EESAAQMAQT
GVLSLAPAAQ QMDDAANYQV VDVGVLAIRG YKGTINRWQP LMGWLESQIP NSYFRLHPLS
LEELARGVET EALDFVITNP GQSVMLARQY SLSWLATLRS PINNGAAMQV GSALVVRADS
PYKTLSDLKG KRLGIVSKNA FGGYLTMVYE AQLKGIDLIH LVGDIIPLGF PLDNLVYQLG
GSGQQGGTSE LSGTDEPSVK TSSGKAPSVK ALGLDAAIVP VCQLEQMQAE GLINIKDYRV
LDNQAPVGFH CQVSSRLYPN WSMAKTNRAI QTLAKQVTQA LLALPEDSPA ARAAESAGWT
TAVSQLAIDQ LLKDLDMHPL QTPWWQRAWQ WVKLHQHWAW LALAILVLLN VYHFWLEYRF
SRRGRELINT QRQLSENRAL LEHAQRIAIA GELGASLSHE LNQPLAAIGH YCHGAEVRLQ
RGTRPEELQA VLNLIQQEVS RADSIISRLR NLLKKRPVSK QPLYLHQLVN DTAPLLAYEL
EQHQIQLSTN ISGEAYQLPL DEVGMQQLLL NLLKNAADAC VQRQQAELDP AKPYLPTIDI
DLRYLERKLL LTVTDNGTGL TEDANLLMQA FYSTKSEGLG LGLVICRDIA ESHGGRFSLE
TALSGGCQAQ VSLPRKLDGA PV
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