| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0630 |
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| Symbol | |
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| ID | 4251527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 727685 |
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| End bp | 729868 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117193 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_732767 |
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| Protein GI | 113968974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0349605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.294722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC TTAGCCCTAC ACGCCTCAGT ATATTGGCCT GCGCATTAAC CACCGCCTTC
AATGCCCAAG CCAATTCACC CACTCAAGCC CCCGCAAAAA TAGAACAGAT CAGTATTTTC
GGCAGTAAAA ATCCTCTCGA TACCACGCCA GGTAGCGCCC ATCAAATTAC CGAAGCTGAA
TTAGAAACCT TTAAATATTC CGATATTATG CGCACCTTGA CCTCTGTGCC CGGCGTCTAT
ATTCAAGAAG AAGATGGTTA TGGTCTGCGC CCAAACATTG GTATGCGTGG CACGGGACAA
AATCGTTCTG AAAAGATTAC CGTGATGGAA GATGGTGTTC TCGCCGCTCC CGCCCCCTAT
GCCTCCCCAG CGGCTTACTA CTTCCCCACC TCAGGTAGAA TGCAATCGGT TGAAATCCTT
AAGGGAAGCT CAACGGTAAA ATATGGCCCC CGCACCACAG GTGGAGTGAT TAACATGCTG
TCTCGGCAAA TTCCTCAAGA GACATTAGCC GGCAAAATTG ATCTGGCCTT AGGCCAAGAT
GGCTTCGGTA AATTACACAC CTATGCCGGC GGACAAGGCA AACGTATTGG CGCAGTGGCC
GAGATTTATC GCTATCAAGC CGACGGATTT AGGGAGATAA ACACGGTCGG CGGCGACACT
GGCTTTACTA AAAATGATGC CTTAGCCAAG GTCAGAGTTA ACACCGACAG CACGGCCACA
TACCAGCAAT CCCTTGAACT CAAATTGAAA TTTGCCGATG AGACCTCTAA CGAAACCTAT
ATGGGTCTGA CCGATGCGGA TTATCAGGCC TCGCCCTATA GTCGCTATTC TGCCTCACAA
AAAGATCAGA TGACCACAGA GCATAAGCAA GTGCAGCTCA ACCATATTAT CGATTTTAGC
GACACACTAA GCCTTAGCAG CATTGGCTAT TACAATGATT TTCATCGTAA TTGGTATAAG
GCCGACAAGG TTGGTGGCGA ATCATTAAGT GGCAAAGGGA TCCAAAATGC TGCCGACTTT
GACGCGGGTC TGCTCTCTGA GCTTGAGGTC AATGTCAAAG CCAATAATCG CAGTTACCTC
GCCCAAGGGA TACAAACGGA ACTCAATTGG TTACTCGGGG ATCACGACCT CGCCTTTGGT
CTTCGCTACC ATGAAGATGA GATGGACAGA TACCAATGGG CCGACAGTTA TGCAATGGAC
GCCAACAGTG TCATGTTACG CACTAAGAGT GGTGTCCCGG GCACCGACTC TAACCGTGTC
GATAGCGCCA CGGCATTTGC GGCCTATGTG CAGGATAAAA TCAGCCTAGA TGCTCTCACC
ATTACCGCCG GCCTTCGCTG GGAAGATGTC GAAACCCAAC GCCGCGATTG GGGCAAGAAG
AACCCCGGCC GCGAGGGGAA TCCCGATAAA CAGGTTGAAA GCCAGTTCAA TGCACTGCTG
CCTTCGTTAT CAGCAACTTA CCAGATTAAT GAGCAAGTAT TACTTCTGGC TGGGGTACAG
AAAGGTTTCT CGCCCGCCGC GCCCGGCAAC GCTAAGGGGC AAGAAGAACA AAGCTGGAAC
TATGAGGCTG GCGTTCGCTA CCATCAAGAT GCATTTAGTG CAGAGTTAAT CGGTTTCTAC
AGCGATTACA GTAATATGCA CGGCAACTGC ACGGCGGCGC AGGGTTGTGA TGACGCTAAA
CTCGACAACC AGTACAACGC AGGCGAAGTG GAAGTCAAAG GCCTCGAACT CAGCCTCGCC
CACGAGTTTA ACCGCACCGG AGCGATGAGT TTTCCAGTCA AACTCGCCTA CACCTACACG
GATGCCGAGT TTGGCAATAG TTTCGAATCT GAGTTTGAAA CTTGGGATAA AGTTGAAGCG
GGTTACAAGT TAAGCTATCT ACCTGAAAAC CAATTGTATA TTTCAGCAGG TGTGCAATCG
CAGAGCTGGC AAGTCACAGT GGCGGCACGT TATACCGATG AGATGCGAAC CAAAGCAGGT
GCAGGCGCTA TTCCCGCAGA TGAAGTGATT GAGGCCAAAA CCTTAGTGGA CTTGTCGGCG
CGTTACTTTG TCACCCACAG TCAGGAAGTG TACTTAACCG TAGACAACCT CTTAGATGAA
ACCTATATGA CGACGCGAGT ACACGGCTCT ATTTTTGCCG GAAAGCCTCA AACGGTCACA
CTCGGTTACA GCTATAAATT TTAA
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| Protein sequence | MTQLSPTRLS ILACALTTAF NAQANSPTQA PAKIEQISIF GSKNPLDTTP GSAHQITEAE
LETFKYSDIM RTLTSVPGVY IQEEDGYGLR PNIGMRGTGQ NRSEKITVME DGVLAAPAPY
ASPAAYYFPT SGRMQSVEIL KGSSTVKYGP RTTGGVINML SRQIPQETLA GKIDLALGQD
GFGKLHTYAG GQGKRIGAVA EIYRYQADGF REINTVGGDT GFTKNDALAK VRVNTDSTAT
YQQSLELKLK FADETSNETY MGLTDADYQA SPYSRYSASQ KDQMTTEHKQ VQLNHIIDFS
DTLSLSSIGY YNDFHRNWYK ADKVGGESLS GKGIQNAADF DAGLLSELEV NVKANNRSYL
AQGIQTELNW LLGDHDLAFG LRYHEDEMDR YQWADSYAMD ANSVMLRTKS GVPGTDSNRV
DSATAFAAYV QDKISLDALT ITAGLRWEDV ETQRRDWGKK NPGREGNPDK QVESQFNALL
PSLSATYQIN EQVLLLAGVQ KGFSPAAPGN AKGQEEQSWN YEAGVRYHQD AFSAELIGFY
SDYSNMHGNC TAAQGCDDAK LDNQYNAGEV EVKGLELSLA HEFNRTGAMS FPVKLAYTYT
DAEFGNSFES EFETWDKVEA GYKLSYLPEN QLYISAGVQS QSWQVTVAAR YTDEMRTKAG
AGAIPADEVI EAKTLVDLSA RYFVTHSQEV YLTVDNLLDE TYMTTRVHGS IFAGKPQTVT
LGYSYKF
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