| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0613 |
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| Symbol | astD |
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| ID | 4251194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 707805 |
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| End bp | 709268 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117176 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_732750 |
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| Protein GI | 113968957 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT TTATTAAAGG CCAGTGGCAA GCTGGCAAGG GTCATGATAT GACCTCTAGC
AACCCAGCAA ATAGCGAAAT CATTTGGCGC GGCCAAACGG CGACGGCTGA GCAAGTCAAT
GCCGCCGTCG ATGCCGCCCG TGAAGCTCAG TTCGATTGGT TTATGTTAGG TTTTGATGCG
CGTTTAAAGA TAGTCGAAGC CTATCGCAGT CAACTCGAAG CGAACAAAGC CGAATTAGCC
GAAACGATCG CTCAAGAAAC CGGTAAACCT CAATGGGAAA CGGCAACTGA AGTCGCTGCC
ATGATTGGTA AGATTGGCCT GTCGGCCACA GCTTACAACA AGCGTACCGG CACTGAGGCC
AATGACACGC CAGCAGGGCG TGCAGTACTG CGCCATAAGC CGCACGGTGT GGTTGCTGTG
TTTGGGCCTT ATAACTTCCC AGGGCATTTA CCCAATGGTC ATATAGTGCC AGCGCTGCTT
GCGGGCAATA CCGTGGTGTT TAAGCCCTCA GAATTGACCC CAAAAGTGGC CGAGTTAATG
GTTTCTCTGT GGGAAAAGGC GGGTCTGCCT GCGGGTGTTA TCAACTTAGT GCAAGGTGAA
GTCGATACGG GTAAGGCGCT GGCGTCGCAC CCACAACTCG ACGGCCTGTT CTTTACCGGT
AGCTCTCGCA CTGGTCACCT GTTGCATCAG CAATATGCGG GTCATCCGGG TAAGATCCTC
GCCTTAGAAA TGGGCGGTAA TAACCCGCTG ATTATTAAAG GCGTCGCCGA TATTAAAGCG
GCGGTGCACG ATATTCTGCA ATCGGCTTAT ATATCTTCTG GCCAGCGTTG TACCTGTGCC
CGCAGGCTCT ATGTTGAGCA AGGCGAGCAG GGCGATGCCT TAGTCGCCAA GCTGGTTGAA
GCAGTGAAGC AGATTAAAGT CGGTCCTTGG AACGCGCAGC CACAGCCATT TATGGGCTCA
ATGATTTCCG AAGGTGCAGC GAAAGGTATG GTCGCGGCGC AGGCTAACTT GCAGAACTTA
GGCGGAGTGT CGCTGGTTGA ACTCACTCAT TTGCAGGCGG GAACGGGCTT AGTCTCACCC
GGACTTATCG ATGTGACTGC GGTGAGCGAG TTACCCGATG AGGAATACTT CGGACCATTG
CTGCAATTAG TGCGCTACAA CGATTTTGAT CAGGCGATTA AGCTTGCTAA CCAAACCCGT
TATGGTTTGT CTGCGGGTAT CTTGGCCGAT AGTCGTGATG ATTATGAGTA TTTCCTCGCC
CGCATTCGTG CGGGGATTGT GAACTGGAAC AAGCAGATCA CTGGTGCTTC AGGTGCTGCG
CCCTTTGGTG GTGTAGGCGC TTCAGGTAAC CACAGGGCGA GTGCATTTTA TGCCGCTGAT
TACTGTGCTT ACCCCGTTGC CTCCGTTGAG GCGGATGCGG TGAGCTTACC CGCAAGTTTA
AGCCCAGGAT TAAGTTTAGA ATGA
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| Protein sequence | MTHFIKGQWQ AGKGHDMTSS NPANSEIIWR GQTATAEQVN AAVDAAREAQ FDWFMLGFDA
RLKIVEAYRS QLEANKAELA ETIAQETGKP QWETATEVAA MIGKIGLSAT AYNKRTGTEA
NDTPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAELM
VSLWEKAGLP AGVINLVQGE VDTGKALASH PQLDGLFFTG SSRTGHLLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVADIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALVAKLVE
AVKQIKVGPW NAQPQPFMGS MISEGAAKGM VAAQANLQNL GGVSLVELTH LQAGTGLVSP
GLIDVTAVSE LPDEEYFGPL LQLVRYNDFD QAIKLANQTR YGLSAGILAD SRDDYEYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPASL
SPGLSLE
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