| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0611 |
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| Symbol | argD |
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| ID | 4251192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 705431 |
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| End bp | 706648 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117174 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_732748 |
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| Protein GI | 113968955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.894863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTG ATATGAAGTT GAATCGTGCC CAGTTTGATG CGGTTATGGT GCCTAACTAT
GCGCCAGCTG CCGTAATTCC TGTACGTGGC GAAGGAAGCC GAGTATGGGA TCAAGAGGGT
AACGAGTTTA TCGATTTTGC CGGCGGTATC GCGGTAAATT GCTTAGGTCA CTGTCATCCA
GCCTTAGTGA ATGCCTTAAA AACGCAAGGC GAAAAATTAT GGCACCTGTC TAACGTGATG
ACCAACGAGC CGGCGCTTGA GCTTGCGACT AAGTTGGTTA ACAGCACGTT TGCTGAGCGT
GTGTATTTTG CTAACTCTGG TGCCGAAGCC AACGAAGCGG CACTGAAATT AGCTCGTCGT
TATGCCTTAG AAAAATTCGG CGTAGAGAAA GATGAAATCA TCGCCTTCGA TAAAGCCTTC
CACGGTCGTA CTTTCTTCAC CGTGAGCGTT GGCGGTCAAG CGGCCTATTC AGATGGTTTT
GGTCCAAAAC CACAAAGCAT CACCCACTTA CCTTATAACG ATGTTGCGGC ATTAGAAGCG
GCCGTATCGG ATAAAACCTG CGCCATTATG CTTGAGCCAC TGCAGGGTGA GGGCGGTATT
ATTGATGCCG ATCCTGCATT CTTAAAAGCG GTTCGCGAAC TGGCCAACAA GCACAACGCA
CTGGTGATTT TCGACGAAGT ACAAACCGGT GTAGGCCGTA CTGGTGAACT CTACGCTTAC
ATGGGCACCG ACATAGTACC GGATATCCTG ACCACGGCTA AAGCGCTGGG CGGCGGTTTC
CCTATCGCAG CTATGCTGAC GACCGCAGAA ATCGCTGAGC ACCTGAAAGT GGGTACTCAC
GGTTCAACCT ACGGTGGTAA CCCATTAGCT TGTGCTATCG GTAACGCGGT ATTAGACGTG
GTTAACACAC CAGAAGTCTT GAACGGTGTG AAACATCGCG AGCAGTTGTT ACGCGATGGT
CTGAACAAAA TTAATGAAAA ATATCATGTT TTCTCTGAAA TTCGCGGTAA AGGCTTGCTG
TTAGGGGCGG TTCTAAACGA ACAGTACCAA GGTCGTTCAC GTGACTTTTT AGTAGCGTCT
GTTGCTGAAG GCTTAATGAG CCTGATGGCG GGTGCTAACG TGGTACGTTT TGCTCCTTCA
CTGGTGATCC CTGAGGCAGA TATTGCAGAA GGCCTAGCAC GTTTTGAGCG TGCTGTGGCG
AGCATCGCTG CTGCCTAA
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| Protein sequence | MSVDMKLNRA QFDAVMVPNY APAAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP
ALVNALKTQG EKLWHLSNVM TNEPALELAT KLVNSTFAER VYFANSGAEA NEAALKLARR
YALEKFGVEK DEIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHL PYNDVAALEA
AVSDKTCAIM LEPLQGEGGI IDADPAFLKA VRELANKHNA LVIFDEVQTG VGRTGELYAY
MGTDIVPDIL TTAKALGGGF PIAAMLTTAE IAEHLKVGTH GSTYGGNPLA CAIGNAVLDV
VNTPEVLNGV KHREQLLRDG LNKINEKYHV FSEIRGKGLL LGAVLNEQYQ GRSRDFLVAS
VAEGLMSLMA GANVVRFAPS LVIPEADIAE GLARFERAVA SIAAA
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