Gene Shewmr4_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0606 
Symbol 
ID4251187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp698894 
End bp699331 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID638117169 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_732743 
Protein GI113968950 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000126975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.116605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGT TGACTCCAAA TCGTCCTTAT TTACTCAGGG CTTACTACGA TTGGTTGATG 
GACAACCAAT TAACGCCTCA CGTTGTCGTG GATGCCTTTG TGAAAGGCAC TCAAGTACCG
CAGCAATACG TGAAGGATGG CCAGATTGTA TTAAATATCG CGGCCGGCGC AGTGGGCAAT
TTGCAAATTG GTAATGAATT TGTGGAGTTC AATGCGCGTT TCGGTGGTGT ACCTCAGCAG
GTACTATTAC CAATGGCTTC GATTGTAGCC ATTTACGCCC GTGAAAATGG CGCAGGAACT
GTCTTCGATA TTGAAGATGC GTACTTAGTC GAAGAGGAAG CCGAATCGAC TTTGTCCGTT
ATCGAGACAA ACGAGAAGCC AACCGAACCA ACGGATGAGC CTCCTAAGCG CCGCAGTCAT
TTAACTTTGG TTAAGTAA
 
Protein sequence
MKALTPNRPY LLRAYYDWLM DNQLTPHVVV DAFVKGTQVP QQYVKDGQIV LNIAAGAVGN 
LQIGNEFVEF NARFGGVPQQ VLLPMASIVA IYARENGAGT VFDIEDAYLV EEEAESTLSV
IETNEKPTEP TDEPPKRRSH LTLVK