Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0603 |
Symbol | |
ID | 4251184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 696256 |
End bp | 697470 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117166 |
Product | cytochrome b/b6 domain-containing protein |
Protein accession | YP_732740 |
Protein GI | 113968947 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000103095 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0561448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAGA ATTTAATTAA TTGGATCGAT GCGCGTATCC CAATGACGGC GACGTATAAC CGTCACGTGG GTCAGTATGC GACGCCAACT AACTTTAACT TTTGGTACTT CTTCGGTTCA TTAGCCATGT TGGTATTGGT TAACCAATTA CTGACGGGTA TCTGGTTGAC CATGAACTAT GTACCTACAG CAGAAGGTGC TTTTGCCTCT GTTGAATACA TCATGCGTGA CGTAGAGTAC GGCTGGTTAT TGCGTTATAT GCACTCAACT GGTGCGTCTG CATTCTTCGT GGTGATCTAC TTACATATGT TCCGTGGTCT GATTTACGGT TCATATCAAA AGCCTAGAGA ACTGCTGTGG CTATTCGGTA TGTTGATTTT CCTCGTGCTG ATGGCTGAAG CCTTTATGGG TTACTTGCTG CCATGGGGAC AAATGTCTTA CTGGGGCGCG CAGGTAATTA TTTCTCTGTT CGGTGCTATC CCTGTTATCG GTGATGACTT AACCCTGTGG ATCCGTGGTG ACTACGTGAT CTCTGGCGCG ACACTGAACC GTTTCTTCGC TCTACACGTT ATCGCACTGC CATTAGTGTT AGTGGTTTTA GTGTTCCTAC ACTTAATCGC ACTGCACGAA GTGGGTTCAA ACAACCCAGA TGGTATCGAA ATCAAGAAAA ACAAAGACGA GAACGGCTGG CCAGTTGATG GTATTCCATT CCACCCATAC TACACAGTTA AAGATATTAT GGGCGTTGCG GGCTTCCTGA TCGTGTTCTG TTACGTGCTG TTCTTCATCC CAGAAGGCGG CGGTTACTTC CTTGAGAAGC CAAACTTCGA AGCGGCTAAC CCAATGAAGA CACCTGAGCA CATTGCACCT GTATGGTACT TCACTCCGTT CTACGCCATT TTACGTGCTG TTCCCGATAA ATTGGGCGGT GTGGTAATGA TGGGTCTGTC GATTGCAGTA CTGTTCGTGT TGCCTTGGTT AGACCGTTGT AAAGTGAAGT CAATTCGCTA CCGCAGCACG CTGCACAAGT TGAACATTGC TCAGTTTGCT ATTTCATTTA TCGTCTTAGG TTACTTAGGT GCTGTACCTG CAACACCTGA GCTGACGATT GCTGCACGTA TCTTCACTGT AACGTATTTC GGCTACTTCT TATTACTGTG GTTATATAGT AAAAATGAGA AAACTAAGCC TGTTCCAGCG AGGTTGACAC ACTAA
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Protein sequence | MVKNLINWID ARIPMTATYN RHVGQYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY VPTAEGAFAS VEYIMRDVEY GWLLRYMHST GASAFFVVIY LHMFRGLIYG SYQKPRELLW LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDYVISGA TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PVDGIPFHPY YTVKDIMGVA GFLIVFCYVL FFIPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI LRAVPDKLGG VVMMGLSIAV LFVLPWLDRC KVKSIRYRST LHKLNIAQFA ISFIVLGYLG AVPATPELTI AARIFTVTYF GYFLLLWLYS KNEKTKPVPA RLTH
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