Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0596 |
Symbol | mutL |
ID | 4251719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 688666 |
End bp | 690600 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117159 |
Product | DNA mismatch repair protein |
Protein accession | YP_732733 |
Protein GI | 113968940 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0279132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000183924 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGGATCC AGATCCTTCC GCCGCAACTA GCCAACCAAA TCGCCGCCGG TGAGGTGGTC GAACGGCCTG CTTCCGTGGT GAAGGAACTT GTCGAGAACA GCCTAGATGC TGGGGCGACG CGTATCGATA TCGAAATCGA TAAGGGCGGC AGCAAGCTGA TTAAGATCCG TGACAATGGT TCGGGGATCC CAAAGGATGA GCTGGCTTTG GCCTTGTCGC GCCATGCCAC CTCGAAACTG CACTCCCTTG ACGACCTTGA AGCCATCCTC AGCTTTGGTT TTCGCGGCGA GGCATTGGCG AGTATCAGCT CTGTGTCCCG CTTAACCTTG ACCTCGCGTA CGGCCGAGCA AACGGAAGCC TGGCAGGCTT ATGCCGAAGG CGTCGACATG GCGGTTAAGG TCATGCCGGC CGCGCATCCT GTTGGTTCAA CTATCGAAGT TGTCGATCTG TTCTTTAATA CGCCCGCCCG TAGACGTTTT CTTAAAAGCG ATAAAACCGA ATTTACTCAT ATCGATGAAT GGTTAAAACG CATTGCGTTA GTGCGTGGGG ATATCCACTT TACCTTGACC CACAATGGCA AAACCGTACG TAACTATCGT CCGGCGATGA ATGAGCCGCA GTATTTGCAG CGATTGACTC AGGTTGCTGG ACGCCAATTT GCCGATGAGG CGTTGCGGGT CGAATGCCAA CACGATGACC TACGTTTAAG TGGTTATTTG CAGTCGCCTT GGTCAACGGT GTTAACCGAC ACCCATTATT TTTATGTGAA TGGCCGCTTA GTGCGCGACC GTTTAGTCAA TCATGCGGTG CGCCAAGCAT TTGCCCAGAA AGCCGAGGTC GAACAGCCGG GTTATGTGTT GATGCTGGAT ATCGATCCTC ATCAGGTGGA TGTGAACGTG CATCCGGCGA AACACGAAGT GCGCTTTCAT CAGAGCCGTT ATGTGCATGA TTATATTCTG CAGGCACTGC AATCGGCGCT CGAAGAAGCG GGTGAGCTGG GTTTTGAGCA TCCTTTCGAG CCAAGTTCGC CACAGGTTAG GGATGAGGTC TCTCTCTCCG AATCTGGGAC GCAGACACAA ACAGAGCATC ATGCCTTCGA GCTGCAATCG CCTGAATCTA AAACGCATTC AACTTGGAAT GAAGCTTCAC GTGTTGATAC TTCTCGCGTC GAGATATCAC GGGATTCTCA GCTTACTGAG CGTACTCGGG ACATTGCTAG CGCGCGTCCG TATTCTGGCG TGCAAAGCAA TGCCTACGGC AGTATGGCGG TTCCGCGGGA GTCACGCAGT GGTCCGACAG GGGAAAGTCG TGCCCGAGCC GAGCTTCCTT CTAAGGCGGC AATCGCCAGT TACGGCGAAT TATTGCAAAC GCCATCCTAT AGCGTGCAGG ACAAGCCGTA TCAACCCGTG CTTGCAATGC CCGCCATGCT CAATGGTCAA TATTGGGTAT TAGCGCAAGG GCAAAACCTG AGTCTGTTGC CGATTCAATC TGTGGCGTTA GCGACTCGTA GCCATGAGAT AGAAACAAAG CTGGCAACCG GCTTGATAGG TCAGCCATTA TTGATGCCAG TGTCGATTGC CGCCGATACG GATTGGCCAG CATTACTCGA AGAACATGAA ACACTTATCC GGCAATTAGG ATTAGAACTA ACAATTCGCT ATCAGCAGTT GATAATCAAA AAAGTGCCCC CATATCTCAG GGATAGCCAG TTAGCGAAGG TGATCCCCGA GTGGTTGCAA TCGCTACGTT TTGAAGCGCC AGCACCTAAT GCATTGGCTG TGTGGCTGGC AGAGCAGAGT TTAACTGGAT TTACCTCGGC TGCGGATATT TGGGCGGCCT ATAGTCAGTT AACTGAAGAG AAAAGACAGC AAATTGCCGA TAAAGCAGTA TCCTTACCTT GGCAATCGTG GCTAGAAGAG CAAGCAATTG AATAA
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Protein sequence | MGIQILPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RIDIEIDKGG SKLIKIRDNG SGIPKDELAL ALSRHATSKL HSLDDLEAIL SFGFRGEALA SISSVSRLTL TSRTAEQTEA WQAYAEGVDM AVKVMPAAHP VGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL VRGDIHFTLT HNGKTVRNYR PAMNEPQYLQ RLTQVAGRQF ADEALRVECQ HDDLRLSGYL QSPWSTVLTD THYFYVNGRL VRDRLVNHAV RQAFAQKAEV EQPGYVLMLD IDPHQVDVNV HPAKHEVRFH QSRYVHDYIL QALQSALEEA GELGFEHPFE PSSPQVRDEV SLSESGTQTQ TEHHAFELQS PESKTHSTWN EASRVDTSRV EISRDSQLTE RTRDIASARP YSGVQSNAYG SMAVPRESRS GPTGESRARA ELPSKAAIAS YGELLQTPSY SVQDKPYQPV LAMPAMLNGQ YWVLAQGQNL SLLPIQSVAL ATRSHEIETK LATGLIGQPL LMPVSIAADT DWPALLEEHE TLIRQLGLEL TIRYQQLIIK KVPPYLRDSQ LAKVIPEWLQ SLRFEAPAPN ALAVWLAEQS LTGFTSAADI WAAYSQLTEE KRQQIADKAV SLPWQSWLEE QAIE
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