| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0593 |
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| Symbol | |
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| ID | 4251716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 685218 |
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| End bp | 686717 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117156 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_732730 |
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| Protein GI | 113968937 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.320661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000405423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACAAG ATTTATCGAG TTTACCCACG GCGCTTTATA CGCAGCAGCA GGTGAGATCC
GCCGAATTGC TCGCTGTTTC AGAAGGGGAA ACCACTTTAT ATCAATTAGT TGAACGTGCT
GGTCGTGCGG CATTTGAGTG TTTTACTGAG CAGCGTGAAC TCCATCCTCA GCTTGAAGGA
ATGCCTTTAC TGGTATTGGC GGGCAGCGGC AATAATGGCG CCGATGCGCT AGTCTGCGCG
CGCCTAGCCT TAGAAGCAGG ACATCAGGTC AAGGTGTACT TGCTTAAGAC CCAAGGCACA
GCAGAATTCG AGCAGGCACT TTCTGCCTAT CTAAACCAGG GCGGTGTTAT CGATTCCCCA
AATATCGAAG CGATACAGCA GGCGCCAGTC ATTATCGATG GTCTACTGGG CACTGGAGTT
AAGGGCGCAG TGCGTGAGGA TATTGCTGCA CTGATCCATG CGGTCAATCA GAGCGAGGCT
TGGGTGCTGA GTTTAGATCT GCCCTCGGGG ATCGTTGCCG ATACTGGCGT TGTGGCTCAA
GCCGCGGTGA TGGCGGATGT CACTCTGTGC TTTGGTGGGT TAAAACAGGG GCTTTTGACC
AGCAAGGCGA GACATCACTG TGGCCATTTA ACCTTTGCCG ATCTGGGATT AACGCCTTTC
TTCGATACTG AGAGTGCAAC GCGAGTCGGC GGTGAAATGT TAAAAAGCCA TTTTGCCGCA
AGAGCACGGG ACAGCCACAA GGGGCAATCG GGCAAAGTAA CGCTGATCGG TGGTGACTTT
GGTATGGCAG GAGCCATTCG CCTCGCCAGT GAGGCCTGTT TACGTGCGGG CGCCGGATTG
GTGACTGTGA TCAGTCGCCC TGAGCATCAA CTCACTGTCA ACGTCTCACG ACCCGAATTG
ATGTTTTGGG GCTGTGAACT GGTTGATATG GAAGTCTATC TGCGCCTAGG TTGGGCACAG
GTGGTGGTAC TTGGCCCAGG TTTAGGAAAA CACGACTGGG GTTATAACTT GTTTAAAGCC
GCGGGCTTAA GCGATAAACC CTGTGTGCTC GATGCCGATG CCCTGAATCT GCTCAGTCAA
GAACCGCGCA GGCAAACTAA CTGGGTACTC ACGCCTCATC CCGGGGAAGC CGCGCGGCTC
TTGGGATGCA GTGTCGCCGA CATTGAGCAG GATAGATTTG CTGCCGTGCG TGCTCTGCAG
CAAAAATATG GTGGCGTGGT GCTGCTCAAA GGCGCGGGTA CAGTCATTTT TGATGGAAAA
CAGATGGTCG TGGCACCTGT TGGTAATCCT GGGCTTGCGA GTGGTGGGTG CGGCGATGTG
TTATCTGGTA TTATAGGCGC ACTTATGGCT CAAGGAATGG ATAACATGCA GGCGACCGTT
GTTGGGGTTG TCGTTCATGG CTGCGCGGCG GATTTGGCTG CAGTGCAGGG TGAGCGGGGC
ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
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| Protein sequence | MAQDLSSLPT ALYTQQQVRS AELLAVSEGE TTLYQLVERA GRAAFECFTE QRELHPQLEG
MPLLVLAGSG NNGADALVCA RLALEAGHQV KVYLLKTQGT AEFEQALSAY LNQGGVIDSP
NIEAIQQAPV IIDGLLGTGV KGAVREDIAA LIHAVNQSEA WVLSLDLPSG IVADTGVVAQ
AAVMADVTLC FGGLKQGLLT SKARHHCGHL TFADLGLTPF FDTESATRVG GEMLKSHFAA
RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL
MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSQ
EPRRQTNWVL TPHPGEAARL LGCSVADIEQ DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK
QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG
MLASDLMPFI RQLVNSDLL
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