| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0590 |
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| Symbol | |
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| ID | 4251713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 681625 |
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| End bp | 682689 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117149 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_732727 |
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| Protein GI | 113968934 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000155455 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTAAAA AGAAACCCCT AAGCCAAGGC CAATTACGCC GTATGCGCGC CAATCACGAG
AAACGCCTCA ATCGTGACAA TGGTGATAAA AATGCGCCTG AGTTACAGGA TAGCTCACTC
GGCCCAGAAC AGAGCGGAAC CGTGATCTCC CGCTTTGGCC AACATGCCGA TATTGAAACC
GAAGACGGCC AAATCGTGCG CTGCAATATT CGCCGCACCA TTAAGAGCTT AGTCACCGGC
GATAAAGTAG TGGTGCGCCT CGCCATTGAA ACCCAAGCCA ACAGTGGCAT TGCTGGCATT
GTAGAAGCGG TACACCCTAG ACGCTCCTCC CTCTCGCGTC CCGACTTATA CGATGGCGTG
AAAATTATCG CCTCGAATAT CGACCAAATT TTAATTGTGT CTTCCGTATT GCCTAGCTTT
ACCACTCAGA TTATTGACCG CTATTTAGTG GCGGCCGAAG ACACGGATAT TCCGCCGATC
ATCATTTTGA ATAAAATCGA TCTGCTAACG CCAGAAGAAG CCCCCGCCAT CGAAGCCGCC
TTAAAACGTT ACGAAGCTAT TGGTTATCCC GTGTATAAGG TCAGCAGTAA GTTAGGCGAA
GGCTTAGATA CCATTAAAGC CCTGCTGAAA GATAAAGTGA GCGTATTTGC TGGCCAGTCC
GGTGTAGGTA AATCCTCACT GGTCAACGCC TTACTGCCCG AAGCCGAATT ATTGGTGGGC
GATGTCTCCG ACAACTCGGG GCTGGGTCAA CACACGACCA CCACGGCTAA GTTACTGCAT
TTACCCAGCG GTGGTGATTT AATCGACTCT CCCGGCGTGC GCGAATTTGC CCTCTGGCAC
TTACCCGCCC AACGTGTCGG TTGGTGTTTT ATCGAATTTA GAGACTTTTT AGGTGGCTGC
AAATTCCGCG ATTGTAAGCA CGGTGATGAC CCAGGCTGCG CCTTAAAAGC CGCTGTCGAT
GCGGGTAAGA TTAGCGAAGA TCGCTTTAAT AACTACCATC GTATTATCGC AAGCCTCGAT
GAGCAGCGCC ACGCACGGCA ATTTCGCGCC CAAAGTGATG AATAA
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| Protein sequence | MSKKKPLSQG QLRRMRANHE KRLNRDNGDK NAPELQDSSL GPEQSGTVIS RFGQHADIET
EDGQIVRCNI RRTIKSLVTG DKVVVRLAIE TQANSGIAGI VEAVHPRRSS LSRPDLYDGV
KIIASNIDQI LIVSSVLPSF TTQIIDRYLV AAEDTDIPPI IILNKIDLLT PEEAPAIEAA
LKRYEAIGYP VYKVSSKLGE GLDTIKALLK DKVSVFAGQS GVGKSSLVNA LLPEAELLVG
DVSDNSGLGQ HTTTTAKLLH LPSGGDLIDS PGVREFALWH LPAQRVGWCF IEFRDFLGGC
KFRDCKHGDD PGCALKAAVD AGKISEDRFN NYHRIIASLD EQRHARQFRA QSDE
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