| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0589 |
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| Symbol | psd |
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| ID | 4251712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 680663 |
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| End bp | 681541 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117148 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_732726 |
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| Protein GI | 113968933 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00103153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATAAAG TTAAAATTGC GCTGCAGTAC ATGCTGCCAA AGCACCTGTT ATCTCGCTTA
GTCGGTAAAC TTGCCGCTTC CGAAGCTGGC GCATTAACGA CTGCCGCGAT TAAATGGTTT
ATCAAGCAAT ATAAAATCGA TATGAGCGAA GCGGCTCAGA GCGAACCCGA AGCCTATAAA
AGCTTCAACG ACTTTTTTAC CCGCGCACTT AAGCCTGGTA TTCGCCCAAT TAATACTGCG
GCCAATATCA TGGTCCATCC TGTTGATGGC GCCGTCAGCC AACTCGGCCC CATCAAGGAT
GGCCGTATTT TCCAAGCTAA AGGCCATCAC TATTCTTCAC TCACTTTGCT TGGCGACCAA
GCCGAAGATG CCAAACGCTT TGAAGGTGGG GATTTTGCGA CAATTTATCT GGCTCCAAAG
GATTATCACC GCATCCACAT GCCGATAAAG GGCACGCTGT CGAAGATGAC CTATGTACCG
GGTGAGTTAT TTTCCGTTAA CCCCTTAACG GCGCGCCATG TGCCTGGCCT GTTTGCTCGC
AACGAGCGTG TAGTGGCGAT TTTTGAAACC GAACTTGGCC CGCTAGCTAT GGTATTAGTG
GGCGCAACCA TTGTGGCCAG TATCGAAACC GTGTGGGCTG GCACTATTAC GCCGCCAACA
GGTAAGCAAG TATTCACTTG GGAATACCCA ACGGTCGGTC CAGACGCCAT TACCTTAGAT
AAAGGCGAAG AAATGGGCCG ATTCAAGCTT GGCAGTACCG TCGTCATGCT GTTTGCTAAA
GAGGCTATCG ACACCTTCGC CGAAGGCGTT GAACCCGAAG CCGTAACGCG TATGGGTCAA
GCCTTTGCCA ATCTGAAAGA CCAGTCCTCA GCTGACTAA
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| Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAASEAG ALTTAAIKWF IKQYKIDMSE AAQSEPEAYK
SFNDFFTRAL KPGIRPINTA ANIMVHPVDG AVSQLGPIKD GRIFQAKGHH YSSLTLLGDQ
AEDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARHVPGLFAR
NERVVAIFET ELGPLAMVLV GATIVASIET VWAGTITPPT GKQVFTWEYP TVGPDAITLD
KGEEMGRFKL GSTVVMLFAK EAIDTFAEGV EPEAVTRMGQ AFANLKDQSS AD
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