| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0584 |
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| Symbol | |
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| ID | 4251707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 674366 |
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| End bp | 675301 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117143 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_732721 |
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| Protein GI | 113968928 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.215644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCACA AGTTACTCTT ACTGACCAAG GCGAATGAGC AGTATCGCCA GCTCATTGAG
GCGCAGCAGC TACCTGGGCT TGAGTTGCTC GATGATAATC CCGCGAATAT TGCAGAGGCC
AACATTTGGC TTGCCGAGCC TAAACTTGCC GCACCGCTGG TGCTCCATGC AAAACAGTTA
AAATGGCTGC AATCCAGTTT CGCAGGCATT GATGCCCTGA TGGGCCCAAG AGCAAGAAAA
AATTATCAAC TCACTAACAT CAAAGGTATT TTCGGCCCCT TGATGAGTGA ATATCTATTT
GGTTATCTGC TCGCTCATGT GCGAGGACAC CAATTCTACC AAGCGCAGCA GCGGCAAAAA
AATTGGCAAG TACAAGCAGC GAAGCGCCAC AGTAGCCTGC AAGGAATGCA ACTGCTTATC
TTAGGCACAG GCTCTATCGC CCAGCATGTG GCCAAGACGG CCAAGCACTT CGGCATGCAT
GTTACTGGAA TAAACCGCAG TGGCCGTGAG GTCGAAGGCT TTGATGCGAT CCAGCCGCTC
TCTCAGCTCG CGCAATGCTT AAGCCAAAGC GATGTGGTAA CCAATTTACT GCCAAGCACC
CCAGAGACAC GTTTGCAGTT AAATGCAGAC ATGCTCGCCA CGCTCAAAAC CGATGCCATT
TTAGTGAATG TCGGCCGTGG TGACGTGCTC GATCTCGATG CCCTCAATAC CCAGTTGATT
GCGTATCCTA AACAGCAGGC CATTCTCGAT GTGTTCACGC AGGAGCCACT CCCTGCAAGT
CATCCGATTT GGGAAAGACC CAACGCCATC ATCACGCCCC ATATCTCGGC GCCGAGTCAT
CCAGAACAAA TTGTCAGTAT TTTTAGCGAT AATTATCGCC GCTATATTGC AGCAGAACCG
CTACAAAATC AGATAGATTT TACTAAGGGC TATTAA
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| Protein sequence | MGHKLLLLTK ANEQYRQLIE AQQLPGLELL DDNPANIAEA NIWLAEPKLA APLVLHAKQL
KWLQSSFAGI DALMGPRARK NYQLTNIKGI FGPLMSEYLF GYLLAHVRGH QFYQAQQRQK
NWQVQAAKRH SSLQGMQLLI LGTGSIAQHV AKTAKHFGMH VTGINRSGRE VEGFDAIQPL
SQLAQCLSQS DVVTNLLPST PETRLQLNAD MLATLKTDAI LVNVGRGDVL DLDALNTQLI
AYPKQQAILD VFTQEPLPAS HPIWERPNAI ITPHISAPSH PEQIVSIFSD NYRRYIAAEP
LQNQIDFTKG Y
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