| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0575 |
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| Symbol | |
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| ID | 4251138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 657747 |
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| End bp | 660653 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117134 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_732712 |
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| Protein GI | 113968919 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTG CCTTAGGACA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACAGTCGTAC AAGTTGAAGG CCGTATGGTC ACAGTGTTAT TCCCTGCGAC TGGTGAGAAT
CGTATGTTCT CGCGCAACGA AGCCCCCCTG ACCCGTGTCA TATACAACCC TGGCGATACG
GTTGAAAGCC ATGAAGGCTG GAGCCTCGCG ATTGAAGAAC TCACCGAAAA AGACGGCCTC
GTCGTCTACC ACGGAATCCA CAGCGAAACA GGTGAGAAAG CCAGCCTGCG TGAGACCCTG
TTAAACCACA ACATTCGCTT TAACAAACCC CAGGATCGCC TGTTTGCCGG TCAGATTGAC
CGCCTCGACC GTTTCGGTAT TCGTTACCAA TGCCAGTTAC TGCGTCATCA ATTGGCGACC
TCAGATTTAC TCGGCTTACA AGGTCCACGC GTCGGCCTTA TCCCCCACCA GATGTGGATT
GCCCATGAAG TGGGTCGCCG TTATGCGCCG CGTGTATTGC TGGCCGACGA AGTGGGTTTA
GGTAAAACCA TCGAAGCGGG TCTGATTATC CATCAACAAC TGCTCACTGG CCGCGCCGAA
CGAGTGCTGA TCATTGTACC GGATACCCTG CGCCATCAGT GGTTAGTGGA AATGCTGCGC
CGCTTTAACC TGCGCTTCTC AGTATTTGAT GAAGACCGTT GTGTCGAAGC CTTTGCCGAC
CATGACAACC CTTTCTACAC CGAGCAGTTA GTGATTTGTT CCCTCGAATT ACTGCGTAAA
AAGAAACGTC TCGACCAAGC ACTCGATGCC GACTGGGATC TGCTGGTCGT CGACGAGGCT
CACCACTTAG AGTGGACCGA AGAAGCCCCG AGCCGTGCCT ACCAAGTGGT TGAAGCATTA
AGCGAAGTAG TGCCTGGCGT ATTGTTATTA ACGGCAACGC CGGATCAACT CGGCCATGAG
AGCCACTTTG CGCGTCTGCG CCTACTCGAC CCAGATCGTT TCTACGACTA CGATGCCTTC
CTCGCCGAAG AAAACAGCTA CAAAGATGTC GCCGTTGCCG CCGAAGCCTT AGCGGGCGAC
GCAAAATTAT CCGATGCCGC CATCAACAGC CTCACCGAAT TACTCAGCGA GAAAGACATA
GCGCCGAGCA TTCGTTTAAT TCAAGCCGAA GATATCGATA GCGAACTGCA ACAAGCGGCT
CGCAGCGAGT TACTGCAAGA ATTGCTCGAT CGTCACGGCA CAGGCCGCGT GCTGTATCGC
AACAGCCGCG CCTCGGTAAA AGGCTTCCCG AAACGTATTT TCAACGCCTA TCCCCATGCA
ATGCCTGAGC AGTATCTTAC CGCTGCCCGC GTAAATGAGA TGATGGGTGG TCGTAAGACC
TTAGAAGCGA AAGCGGCACA AGCCCTAAGC CCTGAAAAAC TTTACCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA GTTCGATCCT CGCGTGGATT GGTTAATCGA ATTCTTAAAG
TCGCACCGCA GCAAGAAAGT GTTGATCATC GCCAGTGGCG CCGATACCGC CCTGAGCTTA
GAAGAAGCCC TGCGTACCCG TGAAGGCATC CAAGCCACCG TTTTCCACGA AGGCATGTCG
ATCATCGAGC GCGACAAGGC GGGTGCCTAC TTCGCCCAAG AAGAAGGCGG CGCCCAAGCA
CTGATCTGTT CTGAAATCGG CTCCGAAGGT CGTAACTTCC AGTTCGCCAG CCACTTAGTG
CTGTTCGATC TGCCATTGAA CCCAGATTTA TTAGAGCAAC GTATCGGCCG TCTAGACCGT
ATCGGGCAGA AGAACGATAT CCAAATTCAC CTGCCTTATC TGCAAGATAC GGCGCAGGAG
CGTCTGCTCA ACTGGTATCA CCAAGGTCTG AATGCCTTCG AGCTGACCTG TCCGAGTGGC
CATGTGCTGT ACAGTGAATT TGCCGAAGAT CTGTTGAATG TTCTCGTCGG TGGGGATGAA
GATGAGCTGA CCAATCTGCT CAACCACACC CAAAGCCGTT ACAAAGAACT GAAACACGCT
ATGGAGCAAG GCCGCGATAA GCTGCTGGAA ATCAACTCCC ACGGCGGCGA TAAGGCCAAG
GCGATTGTCG AGCGTTTAGC CCAAAGCGAT CAGGACACTA AACTGATTGG TTCGGTGATC
CGCTTGTGGG ACATTATCGG TGTCGATCAA GAAGATAAAG GTGAAAACTC TATCATCCTG
CGTCCAAGTG AACACATGAT GTTCCCAACC TATCCGGGTC TACATGAGGA TGGCGTGACG
GTCACCTTTG ACCGTGATAC TGCGCTCTCC CGTGACGATA TCGCCCTGAT CACCCAAGAG
CACCCGTTAG TGCAAACAGG CTTAGATCTG ATCACTGGCT CTGACACAGG CACGACGAGC
GTCGCGATTT TGAAAAACAA AGCCTTACCC GCAGGCACCC TGTTCTTAGA ACTGATCTAC
ATGGCGGATG CTTCGGCGCC TAAATCGAGC CAGTTATATC GTTATCTGCC ACCGACGCCT
ATCCGCGTAC TGCTGGATAA AAACGGCAAC GATTTATCCG CTAAGGTGGA TTACACCAGC
TTTGACAAAC AGTTAAGCGC GGTTAACCGC CATATTGGCA GCAAGTTAGT CACAGCATCA
CAACCGATTC TGCATCCATT ATTTGCTAAG GGCGAAGAAT ATGCCCAAGC CGCGGTGGAC
GAGTTAGTGG CGCAGGCGCG TGAGAAAATG ACCAGCCAAC TGACGGGCGA ATTGGACCGT
TTAGAGTCCT TGAAAGCGGT TAACCCGAAT ATCCGTGAGG AAGAGTTGGA ATACCTGCGT
AATCAGATGC AGGAGCTGAG TACTTACCTC AACGCGAGTC AGCTACAGCT CGACGCGATT
CGTATGGTAC TGGTTAGCCA TGTCTAA
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRNEAPL TRVIYNPGDT
VESHEGWSLA IEELTEKDGL VVYHGIHSET GEKASLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGIRYQ CQLLRHQLAT SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RVLIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAFAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVVPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEENSYKDV AVAAEALAGD
AKLSDAAINS LTELLSEKDI APSIRLIQAE DIDSELQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRIFNAYPHA MPEQYLTAAR VNEMMGGRKT LEAKAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASGADTALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQKNDIQIH LPYLQDTAQE RLLNWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVGGDE
DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGDKAK AIVERLAQSD QDTKLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLHEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSDTGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRVLLDKNGN DLSAKVDYTS FDKQLSAVNR HIGSKLVTAS QPILHPLFAK GEEYAQAAVD
ELVAQAREKM TSQLTGELDR LESLKAVNPN IREEELEYLR NQMQELSTYL NASQLQLDAI
RMVLVSHV
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