Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0572 |
Symbol | |
ID | 4251135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 654051 |
End bp | 655046 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117131 |
Product | response regulator receiver protein |
Protein accession | YP_732709 |
Protein GI | 113968916 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCT CTGTACTCAT CTGTGACGAC TCCGCCATGG CGCGCAAACA AATGGCTCGC ACCCTACCGA AAGAATGGGA TGTCGAGATC ACCTACGCTA CCAATGGCGC CGAGGGTTTA GATGCCATTC GCGCAGGTAA AGGCGAAGTT GTCTTCCTCG ACCTTAATAT GCCAGTCATG GATGGTTATG AAGTGCTGCA AACCGTGCAG CAAAACGATC TTCCCGCGCT GATTATTGTG GTCTCGGGTG ATATTCAGAT CAAAGCCCAT GAAAGAGTTA AAGCCTTAGG TGCATTGGAT TTTATTCAAA AGCCCGTCAG TGCCGACGCC ATCAGTAATA TTCTGCAGGA ATACGGCATC CTCACCTTAA CGCAGAAAGA TCAGGCGGAA GAAACGCCGA TGATCAAAGT CGATATGCGT GACGCCTGCC AAGAGATCGC CAACGTCGCC ATGGGGCGCG CCGCCGATCT GTTAGCCAAA CTTCTCGATG TTTTTGTCCT CTTACCTATT CCAAACGTGA ACGTGCTCGA AGTCAGTGAG CTGACGATGG CCCTCAAAGC GACGGAAGAA AGTTCAACGG TATCAGCCCT CTGCCAAGGA TTTATTGGTG CAGGCGTGGC GGGTGAAGCT CTGCTGCTAT TCCACGATTC GAGCTTTCAA GACATGGCGA AACTCATGGG GCTAGCCAAT CCAGAGGACA TTAGCACTGA GATTGAAGTG TTGATCGACA CAGGCAACGT ATTGATTGGC GCCTTCCTAA ACGGGATCTC AGAGCAGCTC GACATGAAGT TCAGCCAGGC TCACCCTGTA GTGCTAGGCC GCCACTGTAC GGTGAATGAT CTTATCCATG ATAACTCGGA AAAATGGCAT AGAACCTTAG CAATGGAGAT TAACTATCGT ATTGAAAACC ATAATGTTCA ATGCGATTTG TTACTGCTAT TTACCGAAGA CTCTATTCCG ACGCTCAGTT ATAAGCTCGG TTATTTACTC GATTAA
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Protein sequence | MTISVLICDD SAMARKQMAR TLPKEWDVEI TYATNGAEGL DAIRAGKGEV VFLDLNMPVM DGYEVLQTVQ QNDLPALIIV VSGDIQIKAH ERVKALGALD FIQKPVSADA ISNILQEYGI LTLTQKDQAE ETPMIKVDMR DACQEIANVA MGRAADLLAK LLDVFVLLPI PNVNVLEVSE LTMALKATEE SSTVSALCQG FIGAGVAGEA LLLFHDSSFQ DMAKLMGLAN PEDISTEIEV LIDTGNVLIG AFLNGISEQL DMKFSQAHPV VLGRHCTVND LIHDNSEKWH RTLAMEINYR IENHNVQCDL LLLFTEDSIP TLSYKLGYLL D
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