Gene Shewmr4_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0560 
Symbol 
ID4251788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp642806 
End bp643696 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content49% 
IMG OID638117119 
Productaldo/keto reductase 
Protein accessionYP_732697 
Protein GI113968904 
COG category[R] General function prediction only 
COG ID[COG4989] Predicted oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT CCCCTTTTAG TTTTTCAGAG TTTGTTGCCG GCTTTTGGCG AATGCACAGT 
TGGCAAATGT CACCCGCCGA GCGACTTAAC CTAATAGAAC AATATTTAGA CTTAGGTGTG
ACCACTATGG ATCACGCCGA TATTTACGGC CAATACCAGT GCGAAACCCT GTTCGGTGAG
GCCTTAGCCT TAAAACCCGC CTTAAGGCAA CAGATGCAAT TGGTCAGCAA ATGCGGCATT
AAGCCCGCCT TCGATTGTCG CCCTGAGCGC TATGTAAACC ACTACGACAC CTCCAAGGCA
CATATTATTG CCAGTGTGGA GCAATCACTA AAGCAGCTGA AAACCGATTA TTTAGATCTA
TTGCTGATCC ACAGACCCGA TCCTTTAATG GACGCCGATC AAGTGGCCGA AGCCTTTGCT
GATTTAAAAC AGGCGGGCAA AGTGCAACAC TTTGGGGTAT CTAACTTCAC CAACGCGCAG
TTTTCATTAT TGCAGTCGAG ATTAACTGAC CCCTTAGTCA CCAATCAAAT CGAAATTTCA
CCGCTAACAA TGGCGAGTTT GCACGATGGT ACTCTCGATT TATGTCAGGA GCGGCGCATT
CGGCCTATGG CTTGGTCCTG TTTGGGCGGC GGTAAGATCT TTGATAATAA CCATCCACAG
GCCATTCGCC TGCAGCAAAC CTTAGCGGTC ATCGCCGATG AGATTGATGC CCAAGATATC
AGCCAAGTGA TTTATGCCTG GGTGCGGATG TTACCGACTC GGCCCGTGCC AATTATCGGC
AGTGGCAATA TTGCGAGGAT AAAAACGGCG GTGGCCGCAC AGTCACTCAC CCTAGACAGG
CAGCAATGGT TTAGTATCTG GCAAGCATCA ACCGGACACA GCGTGCCTTA G
 
Protein sequence
MSGSPFSFSE FVAGFWRMHS WQMSPAERLN LIEQYLDLGV TTMDHADIYG QYQCETLFGE 
ALALKPALRQ QMQLVSKCGI KPAFDCRPER YVNHYDTSKA HIIASVEQSL KQLKTDYLDL
LLIHRPDPLM DADQVAEAFA DLKQAGKVQH FGVSNFTNAQ FSLLQSRLTD PLVTNQIEIS
PLTMASLHDG TLDLCQERRI RPMAWSCLGG GKIFDNNHPQ AIRLQQTLAV IADEIDAQDI
SQVIYAWVRM LPTRPVPIIG SGNIARIKTA VAAQSLTLDR QQWFSIWQAS TGHSVP