Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0560 |
Symbol | |
ID | 4251788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 642806 |
End bp | 643696 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117119 |
Product | aldo/keto reductase |
Protein accession | YP_732697 |
Protein GI | 113968904 |
COG category | [R] General function prediction only |
COG ID | [COG4989] Predicted oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGAT CCCCTTTTAG TTTTTCAGAG TTTGTTGCCG GCTTTTGGCG AATGCACAGT TGGCAAATGT CACCCGCCGA GCGACTTAAC CTAATAGAAC AATATTTAGA CTTAGGTGTG ACCACTATGG ATCACGCCGA TATTTACGGC CAATACCAGT GCGAAACCCT GTTCGGTGAG GCCTTAGCCT TAAAACCCGC CTTAAGGCAA CAGATGCAAT TGGTCAGCAA ATGCGGCATT AAGCCCGCCT TCGATTGTCG CCCTGAGCGC TATGTAAACC ACTACGACAC CTCCAAGGCA CATATTATTG CCAGTGTGGA GCAATCACTA AAGCAGCTGA AAACCGATTA TTTAGATCTA TTGCTGATCC ACAGACCCGA TCCTTTAATG GACGCCGATC AAGTGGCCGA AGCCTTTGCT GATTTAAAAC AGGCGGGCAA AGTGCAACAC TTTGGGGTAT CTAACTTCAC CAACGCGCAG TTTTCATTAT TGCAGTCGAG ATTAACTGAC CCCTTAGTCA CCAATCAAAT CGAAATTTCA CCGCTAACAA TGGCGAGTTT GCACGATGGT ACTCTCGATT TATGTCAGGA GCGGCGCATT CGGCCTATGG CTTGGTCCTG TTTGGGCGGC GGTAAGATCT TTGATAATAA CCATCCACAG GCCATTCGCC TGCAGCAAAC CTTAGCGGTC ATCGCCGATG AGATTGATGC CCAAGATATC AGCCAAGTGA TTTATGCCTG GGTGCGGATG TTACCGACTC GGCCCGTGCC AATTATCGGC AGTGGCAATA TTGCGAGGAT AAAAACGGCG GTGGCCGCAC AGTCACTCAC CCTAGACAGG CAGCAATGGT TTAGTATCTG GCAAGCATCA ACCGGACACA GCGTGCCTTA G
|
Protein sequence | MSGSPFSFSE FVAGFWRMHS WQMSPAERLN LIEQYLDLGV TTMDHADIYG QYQCETLFGE ALALKPALRQ QMQLVSKCGI KPAFDCRPER YVNHYDTSKA HIIASVEQSL KQLKTDYLDL LLIHRPDPLM DADQVAEAFA DLKQAGKVQH FGVSNFTNAQ FSLLQSRLTD PLVTNQIEIS PLTMASLHDG TLDLCQERRI RPMAWSCLGG GKIFDNNHPQ AIRLQQTLAV IADEIDAQDI SQVIYAWVRM LPTRPVPIIG SGNIARIKTA VAAQSLTLDR QQWFSIWQAS TGHSVP
|
| |