Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0546 |
Symbol | |
ID | 4251774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 631628 |
End bp | 632533 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117105 |
Product | alpha-L-glutamate ligase |
Protein accession | YP_732683 |
Protein GI | 113968890 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG GTATCTTATC CCAGTTCCCT GAGTTGTATT CCACCCGACG TTTAGTGGCG GCCTGCGAGA GCCGTGGCCA TGAAGCCGTG GTTATTAATA CCTTGAATTG CTACATGAAT ATCAACTCCA TCAAGCCGAG CATTCATTAT CAAGGCCAAG AGTTAACAGG ATTCGATGCC ATTATTCCGC GGATCCACGC GAGTGTGACC TTTTATGGCT GTGCCGTTGT GCGCCAATTT GAAATGATGG GCGTATTTGC CGCCAACGAC TCGATTTCAA TCGCACGTTC GCGGGACAAG TTACGCGCGC TGCAATTGCT TTCCCGCAAA GGTATCGGCA TGCCAGTGAC GGGATTTGCC AATAAACCCA ATGATATTCC CGACTTGATT AACATGGTGG GCGGTGCCCC TTTAGTGATT AAGTTGTTGG AAGGCACCCA AGGGATTGGC GTGGTGTTAG CCGAAACCAA AACCGCCGCC GAGAGCGTGA TTGAAGCCTT TTTAGGGCTG AAAGCCAATA TCATGGTGCA GGAATATATT AAGGAGTCCA ACGGCAGCGA TATTCGCTGT TTTGTGGTCG GCGATAAAGT CGTGGCTTCG ATGAAGCGCC AAGGGCCTGA AGGGGATTTT CGCTCTAATC TGCACTTAGG CGGCTGCGGC GAGAAAGTAA AAATTACGCC CGAAGAGCGC AAGATGGCGG TTGCCGCTGT GAAAGCCATG GGATTAGTGG TCGCGGGGGT CGATATTTTA CGATCGAATC GCGGCCCCTT GATCCTAGAG GTGAACTCGG CGCCCGGTAT TGAAGGCATT GAGCAGACCA CGGGGATTTC GGTGACTGAG CCTATCGTGG AATATATTGA GAAGATGGTA TTAGCGCGTA AATCGAATCG CGCCGTGATA GCCTAA
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Protein sequence | MKIGILSQFP ELYSTRRLVA ACESRGHEAV VINTLNCYMN INSIKPSIHY QGQELTGFDA IIPRIHASVT FYGCAVVRQF EMMGVFAAND SISIARSRDK LRALQLLSRK GIGMPVTGFA NKPNDIPDLI NMVGGAPLVI KLLEGTQGIG VVLAETKTAA ESVIEAFLGL KANIMVQEYI KESNGSDIRC FVVGDKVVAS MKRQGPEGDF RSNLHLGGCG EKVKITPEER KMAVAAVKAM GLVVAGVDIL RSNRGPLILE VNSAPGIEGI EQTTGISVTE PIVEYIEKMV LARKSNRAVI A
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