| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0529 |
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| Symbol | |
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| ID | 4250883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 609963 |
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| End bp | 611924 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117088 |
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| Product | peptidase M11, gametolysin |
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| Protein accession | YP_732666 |
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| Protein GI | 113968873 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT CTGCCATGAT GTTAAGCAGC TTACTGCTAA CCAACACAGT CCTTGCTGCA
GATATGCGCC CTTTTGAAGG CACGCTTTCC CTCGAGGTGG AAGATTTCCC ACAACATGCG
ATTGAAACGT TTCGTCTCCA CGGTAAACAA AACCAAGTGC ACGACTTAGC CTTAACATCG
ATCCCCCATT GGTTAAAGCC CGGTCAGAGT ATCCGTGTTT TTGGTCAGGC CAATGGCAAG
CAATTGCAGG TGAGCGATAG TAACCTCAGT TTACTGCAGA CCAATGAAAC GTCAGGATCA
GCCCAAACCG TCAACTCGGC CATCACACCT ATCAGTGGCA ACAGAAGCGT TTTAGTGGCT
GAAGTAAACT TTGCGATCAA TCCTGTCATC AGGCTGACTG AAGCAGAGAT CCAAGATCTG
CTATTTAATC AAGCTTCAGC TTTCTACGAA GAAAACTCCT ATGGTTCTGT CACTCTGTCA
GGCGACACGA CCAGCCCAAT CACAGTCAAC GTGGATGTCT CTGTCTGTAA TACTGATGCC
GTTGCCTTAG CCGCAGATCA AGAGCTTAGT GCCCGTGGCT TTAACCCAGA TAATTACGAC
CATGTGATGT ACTTGATCCC AACTCATCCT AAGTGCACCT GGTCAGGCAA AGCCAATGTG
GCAGGCAAAC GTAGCTGGAT TAAGCGAGTA CAGTTATCCA CCATAAACCA TGAATTGGGG
CATAACCTAG GCTTATTCCA TGCCAATAAG AAAGATTGTG GCGCGGTCAC GACAGCTGAC
AGCAGCCAAT GTACCATCAC CGAATATGGC GACTATCTCA GTGCAATGAG TGGCACCAAT
ACTCCCAAGC ATTTCAATGC ATTCCATAAG GAGCAATTAG GTTGGCTTAG TGGCGATCGC
ATCAAGACCG TAAGTACTGA TTCACGTGTA ACCCTATCTC CAGTGGAGGC CGAAGGTAAC
TTCCCATTAT TATTGAAAAT TCCAAATGGT CAGGACACTT CAGGTAACGA GCTGTTCTAC
TATGTCGAAT ATCGTCAGGC AACTGGGTTC GATAGCTCAC TAGCGACTGA AGCAGCCGCT
ATGCTCGATG GCGTAAGATT GCGCGAAGGC GCCAGCAACA ACGCTGCCAG TAGCTATTTG
CTTGATCCAA CACCAAACAG CAGTAGTTAT GATTGGGATG ATATCAGTTT GGCGCCGGGA
CAATCCTTTG AGCAACAAGG AGTGCGTATC GACGTCATCT CTTCCGATAC CGCCTCAGTC
ACCTTAGATG TTGTAATGCA AAATACGGTA ACACAGTGTA TTCGTGGTAA TAGCAGCTTA
GCGGTACAAT CGGCTGTCTC ACAATTGCAA CAAGGGCAGC AAGGTTCGGT TGATTTACTG
CTCACCAACA ACGACAGTAG CGCCTGTCCT GAAAACAATT ACAGCCTGAC AACTCAAGCC
GATGCAGGCT TATATGCAAG CTTAGCGAAT AACAGTGTGA CACTAGCCCC ACAAACCAGC
ATGCACCTGA CCCTATCGCT AGAAGCGTTG CAAGGCAGTG GTAGCAATAC TTGGAAAGTG
ATCAGCAACA ATCAGACAAG CTCACAGCAA GTGATTAGCT CTGGTAGCGT ATTGTTAACT
GCAGCAACCA GTAATACTGC GCCACTCGCT GTGAATGATG ATTTCAACGA TATCAGCGCG
AGTACGGTAC TGAATGTGCT GGCCAATGAC AGCGATTTAG ATGGTGACAG CCTGTTTATC
AGTGGCACCA CTCAAGGACT GAATGGAAAA GTGACTGTCA ACGCTAATAA TACCCTGACC
TATGTGCCAT CGAAACGTTT TAAAGGTAAC GATAGCTTTA GCTACACAGT GAGTGATGGC
AAGTTAACTG CTATCGCCAC AGTCACAATC AGCCCGAGCA CGACAAGCAG TGGTTCGTCT
GATACCAGCA CCGGCACGGG TGGCAAAGGA AAAAATAAAT AA
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| Protein sequence | MKYSAMMLSS LLLTNTVLAA DMRPFEGTLS LEVEDFPQHA IETFRLHGKQ NQVHDLALTS
IPHWLKPGQS IRVFGQANGK QLQVSDSNLS LLQTNETSGS AQTVNSAITP ISGNRSVLVA
EVNFAINPVI RLTEAEIQDL LFNQASAFYE ENSYGSVTLS GDTTSPITVN VDVSVCNTDA
VALAADQELS ARGFNPDNYD HVMYLIPTHP KCTWSGKANV AGKRSWIKRV QLSTINHELG
HNLGLFHANK KDCGAVTTAD SSQCTITEYG DYLSAMSGTN TPKHFNAFHK EQLGWLSGDR
IKTVSTDSRV TLSPVEAEGN FPLLLKIPNG QDTSGNELFY YVEYRQATGF DSSLATEAAA
MLDGVRLREG ASNNAASSYL LDPTPNSSSY DWDDISLAPG QSFEQQGVRI DVISSDTASV
TLDVVMQNTV TQCIRGNSSL AVQSAVSQLQ QGQQGSVDLL LTNNDSSACP ENNYSLTTQA
DAGLYASLAN NSVTLAPQTS MHLTLSLEAL QGSGSNTWKV ISNNQTSSQQ VISSGSVLLT
AATSNTAPLA VNDDFNDISA STVLNVLAND SDLDGDSLFI SGTTQGLNGK VTVNANNTLT
YVPSKRFKGN DSFSYTVSDG KLTAIATVTI SPSTTSSGSS DTSTGTGGKG KNK
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